FMO05821.5prime Sequence
265 bp (265 high quality bases) assembled on 2008-09-02
> FMO05821.5prime
TTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGATGCAGATCA
AGTACTTGTTCGCCCTCTTCGCTGTCCTGATGCTGGTGGTCCTGGGAGCC
AACGAGGCCGATGCCGACTGCCTGTCCGGAAGATACAAGGGTCCCTGTGC
CGTCTGGGACAACGAGACCTGTCGTCGTGTGTGCAAGGAGGAGGGACGCT
CCAGTGGCCACTGCAGCCCCAGTCTGAAGTGCTGGTGCGAAGGATGCGCA
AGCTTTCTAGACCAT
FMO05821.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Drs-RA | 387 | CG10810-RA | 64..273 | 38..247 | 1050 | 100 | Plus |
| Drsl5-RA | 364 | CG10812-RA | 104..261 | 90..247 | 550 | 89.9 | Plus |
| Drsl2-RA | 333 | CG32279-RA | 17..236 | 28..247 | 470 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3369619..3369828 | 38..247 | 1050 | 100 | Plus |
| 3L | 28110227 | 3L | 3316884..3317041 | 90..247 | 550 | 89.9 | Plus |
| 3L | 28110227 | 3L | 3314365..3314584 | 28..247 | 470 | 80.9 | Plus |
| 3L | 28110227 | 3L | 3336202..3336362 | 198..38 | 400 | 83.2 | Minus |
| 3L | 28110227 | 3L | 3335582..3335759 | 247..70 | 245 | 75.8 | Minus |
| 3L | 28110227 | 3L | 3315784..3315843 | 182..241 | 180 | 86.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:13 has no hits.
FMO05821.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:52 Download gff for
FMO05821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drs-RA | 64..276 | 38..251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:44 Download gff for
FMO05821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drs-RA | 51..263 | 38..251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:37 Download gff for
FMO05821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Drs-RA | 64..276 | 38..251 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:37 Download gff for
FMO05821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3369619..3369831 | 38..251 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:52 Download gff for
FMO05821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3369619..3369831 | 38..251 | 99 | | Plus |
