FMO05822.5prime Sequence
323 bp (323 high quality bases) assembled on 2008-09-02
> FMO05822.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGGCACATCG
CAGAAACACAGGAACTTCGTTGCGGAGCCAATGGGCAACAAGTCGGTGAC
GGAACTGGCCGGAATTGGGGAAACCCTCGGTGGACGCTTGAAGGACGCTG
GATTCGATATGGCCTACACCGTTTTGGGACAGTATCTGGTGCTGAAAAAG
GACGAGGAGCTGTTCAAGGACTGGATGAAGGAGGTGTGCCACGCCAGCTC
CAAACAGGCATCCGATTGCTACAACTGTCTCAACGATTGGTGCGAGGAGT
TCTTGGCAAGCTTTCTAGACCAT
FMO05822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baf-RB | 1022 | CG7380-RB | 145..416 | 34..305 | 1360 | 100 | Plus |
| baf-RA | 607 | CG7380-RA | 145..416 | 34..305 | 1360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8029815..8029959 | 161..305 | 725 | 100 | Plus |
| 2L | 23513712 | 2L | 8029606..8029734 | 34..162 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:51:15 has no hits.
FMO05822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:16 Download gff for
FMO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 142..420 | 28..310 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:30 Download gff for
FMO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 140..418 | 28..310 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:06 Download gff for
FMO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baf-RA | 142..420 | 28..310 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:06 Download gff for
FMO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8029603..8029733 | 28..161 | 97 | -> | Plus |
| 2L | 8029816..8029963 | 162..310 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:16 Download gff for
FMO05822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8029603..8029733 | 28..161 | 97 | -> | Plus |
| arm_2L | 8029816..8029963 | 162..310 | 98 | | Plus |
