FMO05823.5prime Sequence
596 bp (596 high quality bases) assembled on 2008-09-02
> FMO05823.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTACGCAGGATA
CTGCCAAGTGTGCGGCTGGCGCTGCAGGTGCCCAAAGCAACCACAACAGC
CGTGAGGAGCACCAGTGGAAGTGTTTACGAACCGGATTACCTGGAGTCCC
TCAAGCCGAAATTCCCGCAGTACGAGAGCCTGAATGTGCAGATCAAGGGC
TACGACTACCCGCAGCTGGAGAGCTACCAGAGGTTTCTGCACGGATTGGC
CGAGTACCTGGACTTGGACGTCTCCGACTGCTACGCCCTCCCTCCGCAAA
AGACCACGGTGCAGCGACTGCGGCCCAACTCCACGGTCATCGAATCGGAG
TACAAGCTGACCACCTACGAGCGCAACCTGCAGCTGAACAATGTGGATGC
GCCAGTCTATCCGCAGTTCTTGCGCCTGGCCCAGGCGGCGCTGCCCGAGG
GTGTGAGCTTGCAGGTGCAGGAGTACACCGACGACTGCGAGGAGCGGCGC
TACGTGCCCGACAAGGAGCTGCTCGACCTGAAGGACGAGCTGGAGCGCAT
GGGCGGACCCACCACCACCAGGAAGAAGGCAAGCTTTCTAGACCAT
FMO05823.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL48-RB | 690 | CG17642-RB | 65..607 | 36..578 | 2715 | 100 | Plus |
| mRpL48-RA | 790 | CG17642-RA | 65..607 | 36..578 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1710849..1711282 | 145..578 | 2170 | 100 | Plus |
| 2L | 23513712 | 2L | 1710598..1710697 | 47..146 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:43 has no hits.
FMO05823.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:08 Download gff for
FMO05823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL48-RA | 58..612 | 28..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:31 Download gff for
FMO05823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL48-RA | 54..608 | 28..584 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:54 Download gff for
FMO05823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL48-RA | 58..612 | 28..584 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:54 Download gff for
FMO05823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1710590..1710697 | 39..146 | 96 | -> | Plus |
| 2L | 1710851..1711287 | 147..584 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:08 Download gff for
FMO05823.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1710851..1711287 | 147..584 | 99 | | Plus |
| arm_2L | 1710590..1710697 | 39..146 | 96 | -> | Plus |
