FMO05825.5prime Sequence
497 bp (497 high quality bases) assembled on 2008-09-02
> FMO05825.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGTTGACGGGA
ACCCAGGACTACGATCGCAAATACCTGCTCAGCATGCCGGGCCTGTGCAA
GCTGGCCTGTTTGCTGTGCAGCTTTGTTGGAATATTGTGCATCATCTGCG
GACCGGTGCGCGTGAGCAATTTCCGCGGCAGTTTCTACCTGGCCGTAGTC
ACCATCGGATTCGTGGCCACCGGCTGCCTGCTCCTGGCCAGGTATCTCCG
GTTGTGGCAGCGCCAGTTCTGCCGATGCGATCCCACGCTCTGGTCCCTGG
CGGTGCACTCCTCATTGGCCCTGGCCTACTTCACGGCCTCCGGACTCGTA
CTCTCCCTGGATATTGGAGCCTATACGGCGGCGGCGTTCTTTGGCCTGAC
AGCATTTTGCATCAACGGACTGGAGGCCTATGGAAACTATCGGCGCAGTC
GCCAGCGGGAGGTGGCCACCCAAACGATAGCAAGCTTTCTAGACCAT
FMO05825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12730-RB | 1892 | CG12730-RB | 814..1257 | 36..479 | 2220 | 100 | Plus |
| CG12730-RA | 1241 | CG12730-RA | 163..606 | 36..479 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5517571..5517844 | 113..386 | 1370 | 100 | Plus |
| X | 23542271 | X | 5518043..5518136 | 386..479 | 470 | 100 | Plus |
| X | 23542271 | X | 5517421..5517498 | 36..113 | 390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:42:53 has no hits.
FMO05825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:13 Download gff for
FMO05825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12730-RA | 159..613 | 32..487 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:50 Download gff for
FMO05825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12730-RA | 157..611 | 32..487 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:00 Download gff for
FMO05825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12730-RA | 159..613 | 32..487 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:00 Download gff for
FMO05825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5517572..5517844 | 114..386 | 100 | -> | Plus |
| X | 5518044..5518143 | 387..487 | 96 | | Plus |
| X | 5517413..5517498 | 27..113 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:13 Download gff for
FMO05825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5411446..5411531 | 27..113 | 94 | -> | Plus |
| arm_X | 5411605..5411877 | 114..386 | 100 | -> | Plus |
| arm_X | 5412077..5412176 | 387..487 | 96 | | Plus |
