FMO05843.5prime Sequence
445 bp (445 high quality bases) assembled on 2008-09-02
> FMO05843.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCAAATTTATCG
GCGTCATCGCTCTCCTGGTCGCCACCGCCAGTGCTGGTCTCATCGAGACT
CACCATGTGGTGCACGAGCCCGTTCTGGCCAAGGTTGGATCGGTGGTGCA
CTCTGCTCCCTCGGCGGTTTCCCACCAGAGCATCACCCAGGTGCACAGCA
AGGCGGTGGTGCAGCCAGTGGTTGCTCCTATCGTGAAGACCACCACCTAC
TCCCATCCCGCCGTTGCCGTCCATGCTGCTCCAGTGGTTCACTCCGTGCC
CGTTGTCCACGCCGCTCCTGTCGTCCACTCCGTTCACTCCGCTCCTGTGG
TGCACTCGGTGCTTCACTCCGCTCCCCTCGTCAAGTCAGTGGTGCACTCC
GCTCCTCTGGCCTACACCCTGCACCACGCAAGCTTTCTAGACCAT
FMO05843.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13060-RA | 539 | CG13060-RA | 71..473 | 35..437 | 1970 | 99.3 | Plus |
CG13041-RA | 513 | CG13041-RA | 68..439 | 35..427 | 1430 | 91.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16319998..16320388 | 47..437 | 1910 | 99.2 | Plus |
3L | 28110227 | 3L | 16319104..16319381 | 330..53 | 1345 | 98.9 | Minus |
3L | 28110227 | 3L | 16319028..16319090 | 427..365 | 270 | 95.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:12 has no hits.
FMO05843.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:59 Download gff for
FMO05843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 63..473 | 25..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:12 Download gff for
FMO05843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 58..468 | 25..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:52 Download gff for
FMO05843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 63..473 | 25..437 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:52 Download gff for
FMO05843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16319998..16320388 | 47..437 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:59 Download gff for
FMO05843.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16313098..16313488 | 47..437 | 99 | | Plus |