FMO05846.5prime Sequence
1186 bp (1006 high quality bases) assembled on 2008-09-02
> FMO05846.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGGAGCTGAATATCTT
TGACGACTGCTGGGAGCTGGTGCAACGATTTCAGCGATTGGTTAATGATG
GCGAAAACTGCGAGTTCGAGGTGTTCTGCCGGTGCTGGCGAGAACTGCAG
CTGCAGCACCTCTTCACTGCCCAGACGAACCACACAGAGGTGATAGCCAC
CACACTGGCGGCCCTGCATGTGGCCAAGCGACTGTCGTGCTCCCGACGCA
CCACCGGGGACGTTTTCCCGGCATCTCGCGCTCAAAGGATCGGAGGTTTC
TTTCTGCTCTACGTAATCTACTACAAGCAGCCCACGCACAACTTTATTAA
GATCGAGGTCTCACCGCGCACTTGGCAAGAACTAACAGACTACGCTCTAG
ATCTGCGCAAGGATAGTCCGGAGCGGAAGGACACTCATCAGATCGCCTAC
ATGCTGTGGCGCCTGACCCAGGAGCAGGCCTTCCGCTTCACCGCGCTCGA
CTATTGCCAGGGGTTGGACAATCTGGTGGACTACGACCGTGTGGAGACCG
TAGCGGGTGCCAAGGAACAGAGGCAGAGTGCCTTGATGCAGAAGCAACAG
CGTGCGAACGGCGTCAGTCTCACATACGAACTGGAGGGTCTGCGAGCACT
GGACCAGGCAAGCCAGCCATTGTGTGAACTGGAAGCGGCATACAATGCCC
AAAAGAAGCAATTGGCGGCTGGTCATGAGCACGCTTTGCCGCCCTCTCAA
ATATTCGGCCATTTGCGAGAAGTCTTTGCCGATATCCAAAGTGTTCTAGG
AGCTAGAAAGAGTACTCCAGATGAGAATTGTACCACAACATCTACAGGCA
ACCAGTTGGAAGTGCGCCAGAGGGTGCGGAACAAGGCCATGTACGGCGTC
GAGGAACGGGAGCCGCAAAACCAGCGGATGACTAGAAGTGCAGCTGGAGG
TCAACGAGACTTATCAACGCCGCATGTCCCCGGCCACCGTTTTTCAGAAG
GACTTCCAGCAGACGTGCAGCAGAGTATGAGATGATGGATTTATTGACGA
CAAGGAAATTGAAGTTGGTGAAAGCGAGGAGGTCACGGAAGAAGACCTCA
GCTATTTTGGATCTGCCAGCTTCTAAACATTCGTTTTGGCCGCGCGTCCC
AGGTAAGGCCATACCAATCATAATCAATCTATCCAC
FMO05846.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pbp45-RA | 1370 | CG9597-RA | 104..1189 | 34..1112 | 5145 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15838327..15839412 | 1112..34 | 4995 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:42:55 has no hits.
FMO05846.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:15 Download gff for
FMO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 92..1196 | 22..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:59 Download gff for
FMO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 48..1152 | 22..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:03 Download gff for
FMO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbp45-RA | 92..1196 | 22..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:03 Download gff for
FMO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15838320..15839424 | 22..1119 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:15 Download gff for
FMO05846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11664042..11665146 | 22..1119 | 97 | | Minus |
