FMO05847.5prime Sequence
1271 bp (1049 high quality bases) assembled on 2008-09-02
> FMO05847.5prime
AGCATACATTTTACGAAGTTATCAGTCGACATGGCGAGGTTGGAAGTTAT
AAGAGGGCTGACCTTTGCCCTGCTGCTGACGCAGTTGCTGGCAGCCCACG
TCGCCCGGGCGGAGGTCATCGATGCGGAGGAGACGGATCGCTTCTGCTAC
CCGGAGTCCTCGAAGAACTCCCGGCGGTCCTGTGAGTGCAGCAACGTGAG
TGCTTCTCCCTGGGGAAACCGAGCCCTGCGCATCGACTGCAGCTACAAGG
ACTACAAGGTGGCGGATCTCTCCCTGCTGCTGCCACTGTACATCGACTCC
CTGGACCTGTCCTGGAACGCCCTGGACTCAGTACCGATCTTCACTAGCGA
CAGTCTGCACCAGCTGAACCTGAGGCACAACAACATTTCGCAGTTGGTGT
CCGGAAACTTCAAGCAACTGACCAGTTTGAGGGAGCTGTATCTGGGCTGG
AACAGCATTGGCAAACTAGAGTCCGGATCTTTTGACGGATTGCCACATCT
GCAGGTCCTTGACCTAGCCCACAACAATCTGCACTTGCTGCCCGGTCATC
TTTTTGCCCCGCTTTTGGTCCTGGGCACCTTGGACATCTCTTGGAATCGA
CGCTTCAACGAGTCTGGCGGGGATCTATACACCGGACTCGGGGTGAACTG
GAAACTCTCCACCTTAAGACTGGACGCTTGTAGCCTAAATGATCTTCACC
TGCCCGTAAATGCACCTCTGAAAGAGCTTTCCCTCCGTCGAAACCAGTTG
AAGCGGATTCCCACACAGCTGCCGGAGACTTTTACTCCGCCTAGACATTA
GCGACAATCTGCTGGAGGAGCTGCTGCCGGAGGACACGGCTAATCTCACC
CAGGTGCGCCAACTTTTTTATCGAGGACATGCCGGTGCTCCAGAGGGTGG
TGGCCAATTTCCCTGACCCACGTAGATGTCCTCGAGACATTTGAGCTTCC
AGACAGCCGTCAGCTTAGCCACTTGGACGCGGAGGCCTTTGGACCATCAT
GACCACCCCCCACCAAAAAAAGAACTCTGCGGTCGCTGAGCTTTCGCCGC
ACTTATGCTGCGCACCTTTAATTCCACGCTTGCGCCGATTTTACTCAGCT
TGCCGAACTGGGACTCTACGTCTGCCGCTGCAGTGTGACTGCAGACTTCG
TCTGGCTGAAACACTGGCGGTCAACACAACGGGGCCGGTCTAAGCGGCCC
GCATCCTGTGATGGTCTGTTACTCTACGCCGGGCGAGCTCCTCTCCGTTG
CCACACCTTGACTGAAAGTAT
FMO05847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4781-RA | 1557 | CG4781-RA | 28..1204 | 31..1206 | 5305 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24641086..24642212 | 1160..31 | 5000 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:05 has no hits.
FMO05847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:30 Download gff for
FMO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4781-RA | 28..1215 | 31..1218 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:00 Download gff for
FMO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4781-RA | 26..1213 | 31..1218 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:28 Download gff for
FMO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4781-RA | 28..1215 | 31..1218 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:28 Download gff for
FMO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24641025..24642212 | 31..1218 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:30 Download gff for
FMO05847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20528548..20529735 | 31..1218 | 96 | | Minus |
