Clone FMO05849 Report

Search the DGRC for FMO05849

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:58
Well:49
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRpS24-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05849.5prime Sequence

445 bp (279 high quality bases) assembled on 2008-09-02

> FMO05849.5prime
GTATAGCATACCTTATACGAAGTTATCAATCCACATGTCCGGTACAACCG
CTACCGTCCGCACCCGCAAGTTCATGACCAACCGCCTGCTCGCCAGGAAA
CAGATGGTCTGCGATGTCCTCCACCCATTATTGTCGTCCGTGAACAAGAC
CGAGATCCGCGAGAAGCTCGCCGCCATGTACAAGGTCACCCCCGATGTGG
TCTTCGCCTTCGGATTCCGCACCAACTTCGGTGGCGGCCGCTCCACCGGC
TTTGCCCTCATCTACGACACCCTGGACTTCGCCAAGAAGTTCGAGCCCAA
ATACCGCCTGGCCCGTCACGGCCTCTTCGAACAGAAGAAGCAGACCCGCA
AGCAGCGCAAGGAGCGTCGCAACAGGATGAAGAAGGTGCGCGGCACTGCC
AAGGCCAAGATCGGCACTGGCAAGAAGGCAAGCTTTCTAGACCAT

FMO05849.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:13
Subject Length Description Subject Range Query Range Score Percent Strand
RpS24-RA 646 CG3751-RA 77..469 35..427 1875 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22640703..22641095 427..35 1875 98.5 Minus
Blast to na_te.dros performed on 2014-11-28 21:15:12 has no hits.

FMO05849.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:05 Download gff for FMO05849.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS24-RA 68..474 26..433 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:20 Download gff for FMO05849.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS24-RA 67..473 26..433 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:46 Download gff for FMO05849.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS24-RA 68..474 26..433 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:46 Download gff for FMO05849.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22640698..22641100 26..433 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:05 Download gff for FMO05849.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18528203..18528605 26..433 97   Minus