FMO05850.5prime Sequence
959 bp (917 high quality bases) assembled on 2008-09-02
> FMO05850.5prime
AGCATACATTATACGAAGTTATCAGTCGACATGACTTTCTACTGGTGGTC
ACACTGGTTCTGGATAACCCTGATCCTGAGTGTTAACTTGCTGTCCAGCC
ATGTCCACACATATCCCAGCCAGGAGGCGGAGTCACTGACCTCCAGCCCG
CATACCCAATCCCAAACGCAGCCCGTGCGCACCACCAAGCTCTACCAAAC
GACGGTCACCCAGATGTGGGGCCCAGCCACCCAGAGCAACATCATGGACC
TGACCCACCGACCCACCACCACACGGCCGGTGGTAACCCCCAGTTATGGT
GGTGGCCCCCAATTGGCCCAGGTCCATGATGTTGAACAGGCAGTGGAGCT
GCAGGAGGAGGATGAGGTGGTGGAGGAGGAGGAGCTGCCGCTCAACGATC
GTGACCAGCAGGAGCAGGATGAGATTCCCGATCAAGAGCGCCGGCAGGAT
GAGGCAGATGCAGATCCAGATGCGGATGCGGATATCGAGGACGCTGTAGC
AAACGAGGAGCTGGCTCAATTCGAGTTCAAGCGATCGGCGGACTTCACCT
CCGACCAGCTGAATAACTTTACGAATTTTAGCAGTAGCACTAGTACAAAT
GGCAGCAGCAGCAGTAGCACCACCACAAAACCAGTTGCAATCAGCAGCAG
TAGTCCCGGCCAGCACAACAACCACCACCGCGAAAAGTGTTTGGCAACAT
CGCCCGGCAGCTGCAATAACACCACGGGGCCGGAGGCAGTGCATCCACTT
CCCACGCCCGGCTGGTTCCGCGGCTACGCCGTCCCACGCCAAAAGATTCC
ACACGGAATTGGCTATCCCAATGAACCTGCTGGCGGGTGCCAACTGGTGG
CCTGGGGTTCACGGTCCACGTCGAAGGCGAAAAGGCGCCGTTCACTCTGA
AAAATGGCATACAAAGGAAGGATGAACTTAGGCGTGGCCAAAGCGAGCAT
AATATTCGC
FMO05850.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12991-RF | 2611 | CG12991-RF | 280..1184 | 30..951 | 3960 | 96.8 | Plus |
CG12991-RE | 2734 | CG12991-RE | 388..1292 | 30..951 | 3960 | 96.8 | Plus |
CG12991-RD | 2713 | CG12991-RD | 388..1292 | 30..951 | 3960 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17596809..17597320 | 82..593 | 2560 | 100 | Plus |
X | 23542271 | X | 17597384..17597726 | 592..951 | 760 | 89.2 | Plus |
X | 23542271 | X | 17596699..17596755 | 30..86 | 270 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-28 19:36:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1056..1166 | 577..684 | 169 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2480 | 580..728 | 164 | 61.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1074..1146 | 580..652 | 157 | 71.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6502..6852 | 371..724 | 156 | 55.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6833 | 580..681 | 150 | 67.3 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7150..7231 | 598..674 | 119 | 66.3 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 8603..8684 | 598..674 | 119 | 66.3 | Plus |
FMO05850.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:43 Download gff for
FMO05850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12991-RD | 388..1298 | 30..959 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:22 Download gff for
FMO05850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12991-RB | 283..1193 | 30..959 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:23 Download gff for
FMO05850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12991-RD | 388..1298 | 30..959 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:23 Download gff for
FMO05850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17596699..17596751 | 30..82 | 100 | -> | Plus |
X | 17596810..17597320 | 83..593 | 100 | -> | Plus |
X | 17597386..17597732 | 594..959 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:43 Download gff for
FMO05850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17490732..17490784 | 30..82 | 100 | -> | Plus |
arm_X | 17490843..17491353 | 83..593 | 100 | -> | Plus |
arm_X | 17491419..17491765 | 594..959 | 91 | | Plus |