Clone FMO05858 Report

Search the DGRC for FMO05858

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:58
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15549-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05858.5prime Sequence

458 bp (458 high quality bases) assembled on 2008-09-02

> FMO05858.5prime
GCATACATTATACGAAGTTATCAGTCGACATGTTGGCCAATCTGTTGACC
CTAAGCTGCCTTCTGGCCCAAATTATCCCTCGGATTTGGGGGCAGTATGC
GGCGGTGAACTGCTCAGATCCCAGGATCGAACTGACATCCTGTGGCCGCT
TCAGTACGAACGGGTGCTGTGCCAAGGGATGTGTGAGGAATGTGCGCGGA
AGGTGCGTCCAGGAGGAGTGCACCGCATCCTGGAGCGGCTGGCTTCAAAG
GCCAGTGACCATGAGCTGCTACTTCCACTGGTTCCTGCTGATCTTCGCCG
GGCTCATCACGGCCCTCATGCTGGGCCTGGTGGCCTGCAACGCGGCCTGC
GAAATAAGGCGCTACCTTCGCCAGCGGAGAATCGAGCGATTCAGGCGCTT
CAGGGATCTGAGCGGAGTCTCCATTGGATCCACTCAGTGCGCAAGCTTTC
TAGACCAT

FMO05858.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG15549-RA 1112 CG15549-RA 50..460 30..440 2055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30936048..30936458 440..30 2055 100 Minus
Blast to na_te.dros performed on 2014-11-28 23:24:26 has no hits.

FMO05858.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:03 Download gff for FMO05858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 22..446 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:16 Download gff for FMO05858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 22..446 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:53 Download gff for FMO05858.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15549-RA 46..466 22..446 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:53 Download gff for FMO05858.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30936042..30936462 22..446 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:03 Download gff for FMO05858.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26761764..26762184 22..446 98   Minus