FMO05859.5prime Sequence
481 bp (481 high quality bases) assembled on 2008-09-02
> FMO05859.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGGCCCAAGTTCCCTTGG
CAATCGTCTCGCACAAGCGCCAGGTGTGCAGCCTGTACAAGCGAGCACTG
CGCAACTTAGAGTCGTGGTACGACCGACGCAATGTCTACCGCTACCGCGC
TGTGCAGCTGCGTGCTCGCTTCGACGAAAACCGCTCCAAAGATCTGGGCG
AGGGCATCCGCCTCCTAGCCTGTGGACAAAGGGAGCTTTTCGAGACAAGG
CATTTCCAGCCCCGAAACTTTGCCAACAGTGCCGGTGGCTGTGCTTTCGA
ACGAGAGGTGATTCCGCCCGACTGGGTCCTGGACTACTGGCATCCCCTGG
AGAAGGCCCAGTACCCCGAGTACTTTGCCAAGCGGGAGCAGCGCAAGAAG
GAGTTTGTGACCTGGTGGGAGAAGCAGTACGGCAAGCCCGACCCCAAGGA
CCTGGGACACCACGCAAGCTTTCTAGACCAT
FMO05859.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9306-RB | 687 | CG9306-RB | 172..603 | 32..463 | 2160 | 100 | Plus |
| CG9306-RA | 787 | CG9306-RA | 88..519 | 32..463 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13370371..13370564 | 463..270 | 970 | 100 | Minus |
| 2L | 23513712 | 2L | 13370624..13370764 | 269..129 | 705 | 100 | Minus |
| 2L | 23513712 | 2L | 13370842..13370939 | 129..32 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:24:32 has no hits.
FMO05859.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:08 Download gff for
FMO05859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9306-RA | 88..526 | 32..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:18 Download gff for
FMO05859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9306-RA | 145..583 | 32..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:58 Download gff for
FMO05859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9306-RA | 88..526 | 32..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:58 Download gff for
FMO05859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13370364..13370564 | 270..471 | 98 | <- | Minus |
| 2L | 13370624..13370763 | 130..269 | 100 | <- | Minus |
| 2L | 13370842..13370939 | 32..129 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:08 Download gff for
FMO05859.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13370364..13370564 | 270..471 | 98 | <- | Minus |
| arm_2L | 13370624..13370763 | 130..269 | 100 | <- | Minus |
| arm_2L | 13370842..13370939 | 32..129 | 100 | | Minus |
