FMO05860.5prime Sequence
945 bp (880 high quality bases) assembled on 2008-09-02
> FMO05860.5prime
TAGCATACCTTATACGAAGTTATCAGTCGACATGCCACGCCCAGAAGCAG
GCGACAGCTTTCTGAAGCGCGAGAAGAACACCCAGGAGGTAGTGGAGAAT
GTGATCGGCGAGCTGAAGAAGATCTATCGGAGCAAGTTGCTGCCGCTGGA
GGAGCACTACCAGTTCCACGACTTTCACTCGCCAAAGCTCGAGGATCCAG
ACTTCGATGCGAAGCCCATGATCCTGCTGGTGGGCCAGTACTCCACGGGC
AAGACGACCTTCATCCGCTATCTGCTGGAACGCGACTTTCCGGGCATTAG
AATTGGTCCGGAGCCAACGACGGACCGCTTCATCGCCGTGATGTACGACG
ACAAGGAGGGTGTGATACCGGGCAACGCCCTGGTTGTGGACCCCAAGAAG
CAGTTCCGGCCGCTGTCCAAGTACGGCAACGCCTTCCTGAATCGCTTCCA
ATGCAGTAGTGTGGCCTCGCCTGTGCTGAACGCCATCTCCATCGTAGACA
CGCCCGGAATTCTCTCCGGCGAAAAGCAGCGCATCGACAGGGGCTACGAC
TTCACCGGCGTGCTGGAGTGGTTCGCGGAGCGCGTGGACCGCATCATCCT
GCTGTTCGACGCCCACAAACTGGACATCTCCGACGAGTTCCCGGCGCTCG
ATCGAGGCGCTCAAGGGACACGACGACAAGATCCGTATTATCCTGAACAA
GGCCGACATGATTGATCACCAGCAGTTAATGCGGGTGTACGGAGCACTGA
TGTGGTCGCTTGGGCAAGGTGCTGCAGACGCCGGAGGTGTCTCGTGTCTA
CATCGGCTCCTTCTGGGACAGCCGCTGCGCTTCGACGCCAACCGCCGACT
GTTCAAGGACGAGGAACAGAATCTGTTCAGGGAACCTGCAGTCCCTGCCG
CGTAACGCCGCCTTGCGCAAGCTGAACGAATCTATTCAGCGGGCG
FMO05860.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Past1-RA | 1866 | CG6148-RA | 192..1103 | 32..945 | 4235 | 97.9 | Plus |
| Past1-RB | 2679 | CG6148-RB | 287..1174 | 56..945 | 4115 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12698117..12698988 | 56..929 | 4010 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:55 has no hits.
FMO05860.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:01 Download gff for
FMO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 182..1103 | 22..945 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:19 Download gff for
FMO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 182..1103 | 22..945 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:46 Download gff for
FMO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Past1-RA | 182..1103 | 22..945 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:46 Download gff for
FMO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12698119..12699004 | 58..945 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:01 Download gff for
FMO05860.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8523841..8524726 | 58..945 | 97 | | Plus |
