FMO05878.5prime Sequence
1267 bp (964 high quality bases) assembled on 2008-09-02
> FMO05878.5prime
TATCAGTCGACATGGCCGACAGCCCGTTCCCGAGGAGCAGCCGCAGTGGC
CTGCTACGCACGACGCTGAACAGCTCGATGCCGCCGCAAAATCTCTCCCA
CTCGCTGCTCATCCTCGAGAAGAGCAACGCGGAGCAGAATGAGCTCTCGC
TGATGGAGGACACCGGCGATGATCTGGATCGGGGCAAGAGCCGCATGGAC
GTGCTCTTCCCGCAGTTCTTCGACGTGCTGCAGGCTCAGGGTAACGGGCA
GGAGGCATTCGAGGTGATCCAATCGCTGACGCAAGTCTGTCGCGGCGTGG
TGGAGCAGCTGGAGCTGGAGATCGATCACGGCATGGGTGGGGAACAGGGC
GCGCGGCAACGCGAGTCTATGCTCACCTGGCTGCGACAGGAGATAAACAC
GTGGCGCCTGCTGCACGCCCTCTTCTACGACCGCATCCTGCTGCAGACGG
ACAGGCAGGCGGATGATGAGATGCAAGATGGCCCCACGCTCGGCGGCAGC
GAGAAGGAGGTCATACAGCAGTTGTACGCCCTCAATGCGACGCTGCGTGA
GTACCAGCTGGTGGTGGACTGGCTGGAGGCGTGCTACGACCGGGGGGAGC
AACAAAACCCACTCCACGCCCACGATCGTATGATGGCGTGGGAGAACACG
CTCTTCCAACTGGAGAACCTGCAGGGCGCCGCCTTTGGCAAGGGCCATAA
GATCGTAACGCGTCTGGATCCAGATGCTCCCGTACGCGAGAAACGACCGT
TGCACGCCCTCGACGAGGAGGACAACCTGCGCCTGTCCCGCGCCATTTTC
GAATTGATACGAGCGGGACGCGTCGACGATGGCCTCAGTTGTGCAAGCAC
TTCGGACAGACGTGGCGGGCGGCGATCCTTGAGGGCTGGCTCTCCACGAG
GATCCCACTTCCAGCAGAATGTCTCGGTGCTGCACGAAAGCTGCCCATCG
AGGGCAATCCACAGAGGGATATCTGGAAGCCGCTGCCGCGTGATGCTGGT
CGATTCCAAGACTATGACGAGTACAGCCGCGCTACGGGTGGGGGTCTTCT
CTGACCACTTGGGCTCGCTGAAAACATTATGCCAGCACTGGACGATTGGC
TCTTGGGCCCATTGAAGTGGCCATCCACTCCGGTGGCAATCCGAAATACC
GCTTGTGTGCCCTCAAACTCCCATCTTAGCCGAAGAATACTGAGCGCGGA
GAGATGAGCACAATGTGGAGCGGATCTCGAGACTGGACGTGCCAGAGATG
TGCCGGTGCGGAATCTC
FMO05878.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nup107-RA | 2715 | CG6743-RA | 126..1239 | 11..1117 | 5020 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10734879..10735946 | 1075..11 | 4775 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:23 has no hits.
FMO05878.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:33 Download gff for
FMO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 115..1212 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:22:56 Download gff for
FMO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 97..1194 | 1..1091 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:58 Download gff for
FMO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup107-RA | 115..1212 | 1..1091 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:58 Download gff for
FMO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10734833..10735952 | 1..1117 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:33 Download gff for
FMO05878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10734833..10735952 | 1..1117 | 97 | | Minus |
