FMO05881.5prime Sequence
904 bp (904 high quality bases) assembled on 2008-09-02
> FMO05881.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCCATAACTACC
TGCAGCCAGTGCACGATCACTTCGATGACGTGGACAGATTCGAGGACGTG
GACGACGACCTATTCCTGCAGAACAAACGGACGGGAGCAGCCAAGCTTCC
GCAGCAGAGGAGCACCAATCCCTTCGAGATGGATGACGATGACGAAGAGG
AGATAACCTCGTCGCCATCAGTGGCCGCACAGCGACTGGCCTATGCTGAG
AAGCGAAGGGCCATTGAGCAGCGAACTCTGGACTCTACCAACAAAAGCTT
GGGTCTGCTCTACGAAACCCAGGAGGTGGGTAAGGCGACGGCCGTGGAGC
TGGCCAAGCAGCGGGAGCAACTGGAGAAGACATCACATCAGTTGGACGAG
ATCAGCTCCACGCTGCGCTTCAGCCAGCGCCATCTGACTGGTCTGAAGAG
TGTCTTCGGCGGCCTCAAGAACTACCTTTCGGGCAACAGGGACCAACCAC
CCACCGCGACTGGTTCGCCCACGGGCAGTCAGTCCTCCCAGGAGGCCAAT
AGCAACATTAACCAGGGTGCCTGTGGCGGTGCTAGCCCCTCGGCTCCGCT
ATCACCAGCGGAGCGCTACGACAATCATCCGGTTAGCCAGCTGCGTGGTG
ATCCCAGCAGCACCTACCAGCCCCAGCGACAGGCGGCCAATCCCTTCCAG
GCCCAGATCGATTCCAATCTGGAGGAGATGTGCAGCAACCTGTCGGTGCT
GAAGATGCTGGCCACCGATCTGGGTGGCGAAATTGAGTCGCAAAATGAAT
TGCTGGATAACATGAACTACAAAATTGAGGATGTCGACTTGAAGATTCAC
AAGCAGAACAAGGACATGAGCAAGCTTCTGAAGAATGCAAGCTTTCTAGA
CCAT
FMO05881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snap29-RA | 1212 | CG11173-RA | 118..968 | 35..885 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23843727..23844310 | 885..302 | 2920 | 100 | Minus |
| 2R | 25286936 | 2R | 23844377..23844646 | 304..35 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:18 has no hits.
FMO05881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:01 Download gff for
FMO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| usnp-RA | 110..973 | 27..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:50 Download gff for
FMO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| usnp-RA | 72..935 | 27..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:56 Download gff for
FMO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snap29-RA | 110..973 | 27..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:56 Download gff for
FMO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23843722..23844309 | 303..890 | 99 | <- | Minus |
| 2R | 23844379..23844648 | 33..302 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:01 Download gff for
FMO05881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19731245..19731832 | 303..890 | 99 | <- | Minus |
| arm_2R | 19731902..19732171 | 33..302 | 99 | <- | Minus |
