FMO05884.5prime Sequence
1252 bp (1006 high quality bases) assembled on 2008-09-02
> FMO05884.5prime
CGTATAGCATACATTAAACGAAGTTATCAGTCGACATGGAGGTGGACCAG
ATTCCCCTGGCCGACGTGGTCTTCGTCATCGAGGGCAGCGCCATCAACGG
AGCCTACATCAACGAACTAAAGACCAACTACATCCTGCCGACTTTGGAGC
ACTTCACCACTGGCTCCATCGACGAGCGGGAATACCTGATTGCGGAGCGC
TTTGCCACTCTGTACGGTATTGTGGTCTACCGTACAGCGGCCAATCTGCT
GGAGCCAGTTTGTTCAACCTATGGTCCCTTTCTGCAGCCCCAAAAAGTGA
TGGAGACGATCGAAAGATTGCCACTAGTGGGAGGCGGAATGGAGTCCTGT
GCCCACATGGCCGAAGGATTTGCTGCGGCCCACGGCTGTTTTGATGACAT
CAGCGAAAGGCGCCAGTTGCTCGATCAGACCAGCGTCCAGAGGCACTGCA
TTCTCATCTGCAACAGTCCGCCGTACCAGATGCCCACAACGGAGTCGTGG
AAGTATCCGGGCAAATCATGTGAGCAGCTGGCGGCGCTCTTCAACGAGCG
CAAAATCAATCTCTCCATTATTGCGCCACGCAAGATGCCGGTGTTGTTCA
AACTTTTCATGAAGGCCGACGGAGATCAGCCCATTACGAGCAAAAACTAT
GCCAAGAACATAAGACACCTAGTGCTTCTAAAGGGATACAGCCTCAAGGA
GAGAGCACCTAGTCCCAACAGCATGGCGGCCCAAATGGCTGCACCCAATG
CGGCACAGGACTACAGTGCAGCAGCAACAACAACAGCAACAAAATCAAGC
TGGTCAGCAACAACAAGGGCAGGGCATGCCCATGGACACCACTCCAGCCC
AGCAGCAGCAACAGCAACAAAACAGCAGCAGCAACAGCAACAACAAGGCA
ATCCTCAGCAGCAGTCATGACATGAACACGATGCAGCACAGCAGCCCGGT
CCAAATCCCTCAGCGGGCTTTACTCAATCCACAGCAGCAGCAGCAACTAA
TGCAGCAGCAGCAGCAGAATCAATTCGTTTCCAATCAAATGCAGAATCAG
AACTTCAGCAAAACGTGGGAACCCGGCCAAAACTGCTGGATGATTCCAAA
CAGCCTGGTCAGGGCGGTCCGCCCTTCAGCAAGGAAACAGCAAGGGGGCG
CGTGTGTACCAAGGCGGCGGCATCAACAAAAACCAAATCTGCTCTGATAT
TCGCGCACATATATGTGCCCGCCGCGTAAACAAAATTGGAGAAATCCTGT
TG
FMO05884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED25-RA | 2766 | CG12254-RA | 114..1290 | 36..1207 | 5265 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20009060..20010230 | 36..1200 | 4940 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:42:40 has no hits.
FMO05884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:11 Download gff for
FMO05884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED25-RA | 106..1300 | 26..1219 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:38:36 Download gff for
FMO05884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED25-RA | 57..1251 | 26..1219 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:28 Download gff for
FMO05884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED25-RA | 106..1300 | 26..1219 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:28 Download gff for
FMO05884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20009052..20010246 | 26..1219 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:11 Download gff for
FMO05884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15834774..15835968 | 26..1219 | 96 | | Plus |
