FMO05890.5prime Sequence
1283 bp (976 high quality bases) assembled on 2008-09-02
> FMO05890.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCGAGCCG
GAGAACAAGCCACCGATCCTGCACATCCTCGTGGTGGGCTTCCACCACAA
GCTGGGCTGCCAGGTGGAGTTCTCGCATCCGCCGCTAATCTCGGGCTCCA
CGGGACGCAACGAATGCCCCTCCGGCTGGAAGTACCTGCCCACTCTGGCT
CTGCCCGACGGCTCGCATAACTTTGCCGAGGACACGGTGTTCTTCAACCT
GCCCAGTTTGTATGAGCCGGCTGAGAGTATCTACGGCGTGTCCTGCTATC
GCCAGATACGCGTGGAGAAGCTAAAGATCCGGACAGCGGACCTCACGCGC
AGCACCGTTCAGAAGTCCGTTTGCATATTGGCCCGCCTGCCCATCTACGG
GTACATCGAGGTGAAGCTAGCCCTCATTGCCGATGCCTTTTTCGATCAGG
GCGACTTCTCCGGCACGGAACTGCTGGCCAAGGCCTATCAGCAGCTAAAT
GCCTGCCTCCAGGACGACGAGTCGCGCCGCCCGTTGCGCCACTTTCACGT
GGGGCTGTCGCTGCGCGAGATCGTACTCCACTGGCGCCACAAGACGCTAA
TGCTCTTCAAACTAATGCTGCTGCAGCGACGAGTGGTGTGTTTCGGTTCG
CCCGTACGCCAAATGTGTGTGCTGATCCTGGGCATGGCATCGCTGGTGCC
GCGGCTGCTGGAGAAGGGCTTCCAGGAGGTGGCCTGTGTGCGCACGTCGC
GTCCCCTGTCGCCCATGCCGGATTTCACTGACTCCCTGCAGCGGGAGGCG
CAGGCCGAACCCAAGCGGAACTGGAGGCAGTGGCTTCCGTAGCAGCTGCC
ACCGATGAGCAGAAACTGACGCCCGAGAGCGCCACAGCGGTGGAGGGCGA
GGCCGAGAGCTGGCCCTCGTCTCTCCGCAGCGTCAGCGGGCGAGGAGCAG
TCAGTGGCGATGACACGTCAACGTTCCACGCCCAACTCACAGTCGCAGGA
CTCATCGAACGGCAGGAACAGTTCGCTGTACAGAAGGGCCACGGTGACCA
CCTACGTCAACCTCGCGCCCTTTGTGCGCCTGTCATTCAGAATGAGTATC
GGGAACCCGTCAGCATCTTCGCCAGCGGCACCTCTGCTGCCGTATCGGCC
CTTACGTAAGGAACCGGCTAACAATCCAGGGGTCTTCCTAGTCTCGGACC
CTCAAGGTCTTTCAGAACTCCTGGCGTGAGTCTGTGTGAACTCGAGGCGC
CATCTGGATATGCACGAGACTCGAGAGACGTTG
FMO05890.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11178-RC | 3279 | CG11178-RC | 538..1657 | 36..1146 | 5010 | 97.1 | Plus |
| CG11178-RB | 3043 | CG11178-RB | 302..1421 | 36..1146 | 5010 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13606445..13607456 | 36..1041 | 4675 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:43:12 has no hits.
FMO05890.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:25 Download gff for
FMO05890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11178-RB | 297..1300 | 28..1028 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:39:02 Download gff for
FMO05890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11178-RB | 270..1273 | 28..1028 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:13 Download gff for
FMO05890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11178-RB | 297..1300 | 28..1028 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:13 Download gff for
FMO05890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13606440..13607443 | 28..1028 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:25 Download gff for
FMO05890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13500473..13501476 | 28..1028 | 98 | == | Plus |
