FMO05892.5prime Sequence
1253 bp (903 high quality bases) assembled on 2008-09-02
> FMO05892.5prime
TATACGAAGTTATCAGTCGACATGCTGTGGACGGTGCATCTGGACGGTGG
GCCACAGCGGGTCAATCACGCAGCGGTGGGCGTGGGCGACTTCATCTACA
GCTTTGGTGGCTACTGCACCGGATACGATTATCGCTACAATGAGCCCATC
GATGTGCACGCCCTGAATGCACACACAATGCGCTGGACTCTGGTGCCCCA
GCAGCTGGACGACGCGGGTGTGCCACTCAAGTATCCGCTGGTGCCCTTCC
AGCGCTACGGACACACGGTGGTGGCCTACAAGGATCGCATCTACATTTGG
GGCGGTCGCAACGACGAGAATCTCTGCAATACCCTCTACTGCTTCGATCC
CAAGACAGCGCAGTGGTCGAGGCCCCAGGTCACTGGCTGTCTACCCGGAG
CGCGGGATGGTCACTCGGCCTGTGTCATTGGCAATAGTATGTACATCTTC
GGTGGATTCGTCGATGAGATCAACGAGTTCAGCAGCGATGTGCATTCCCT
TAATCTGGACACCATGGAGTGGCGCTATGTTCAGACATTTGGCGTGCCGC
CCAGCTACAGAGATTTTCATGCGTCGGTGGCCTACGAACAGGAGCGAATG
TACATCTTTCGGCGGGCGGGGCGATAAGCACAGTCCGTACCACAGCCAGG
AGGAGACCTACTGTCACGAGATCGTCTACCTGGACATGAAGACCAAGGTG
TGGCATCGACCGTTTCACGGCCGGTAAGGTGCCCGTTGGTCGACGCAGCC
ACAGCATGTTCGTTTACAACAAGCTGATATATGTCTTCGGTGGCTATAAT
GGCCTGTTGGATCAGCATTTCAACGATCTGTACACCTTCGATCCGCGCAC
CAAGCTGTGGAACCTGATACGGGCCAACGGCAAGCACCGACGGCGCGTCG
GAGACAGTGCGCCATGTTGATGGCACTATGATGTTCTGTTTGGCGGCACC
AGTCCAAGGAGCGGCTCCTCCAGCTCGCCGGCAGCTGTTTCACCCACTCA
GAAACGGGCGGAACGCAGCGGCTGGCGGAGTGGTCCGCCGGGGGTGGCGC
TTAATCGACTCAGCGATCTGCATGTGCTCCGACTTGGACCCCTCTAAACC
CTGGCACCATGGTGATGCTCCAGCACAGCGTGAATTCCGGGCTGCAGGAG
ACATCGCTCGGACTGCTATGGCTGACACCGAACAGATGACCGGCCCATTA
CACAGCGTGGTCAAGCTTTTCTAAACATACTCGTTTGGAGCGCGCGGACA
CAT
FMO05892.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12081-RB | 1964 | CG12081-RB | 338..1453 | 19..1126 | 5045 | 97.6 | Plus |
| CG12081-RA | 1900 | CG12081-RA | 338..1453 | 19..1126 | 5045 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8589148..8590212 | 19..1079 | 4720 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:08 has no hits.
FMO05892.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:29 Download gff for
FMO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 335..1422 | 14..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:39:05 Download gff for
FMO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 322..1409 | 14..1098 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:47 Download gff for
FMO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12081-RA | 335..1422 | 14..1098 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:47 Download gff for
FMO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8589145..8590232 | 14..1098 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:29 Download gff for
FMO05892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8483178..8484265 | 14..1098 | 97 | | Plus |
