FMO05893.5prime Sequence
1239 bp (1045 high quality bases) assembled on 2008-09-02
> FMO05893.5prime
GAAGTTATCAGTCGACATGTGTCCTGCAGTGCTGAGCTTCAAAATCAACC
AAAAGCCTTATCCTCGTTTACTTAACTTCACAACTAATGAATACATTTTA
TGTTTGCAGACTGGGGAGCTGAACGAGTACACGGAACGTTCCGAGATGCC
AGCTGAGATTATGTGCATGGCTTTGGGAACTGTTCCGGAGGGCGAGCAGA
GATCCTGGTTCTTGGCCGTCGGCCTGGCGGATAATACAGTGCGCATCTTA
TCGCTGGATCCCAACAACTGTCTCACTCCCTGCTCCATGCAGGCCCTGCC
TTCGCCAGCCGAATCCCTTTGCCTGGTCGAAATGGGTCACACGGAGAGCA
CGACTCAGGGAGGTTTGGATGACGATGCTCCCGCTCAGCGCAGTGGCAAC
AATAAGGGAACCATTTACCTAAACATTGGATTGAGCAACGGTGTCCTGCT
GAGAACTGTGCTCGATCCTGTTTCCGGAGATTTGGCAGACACCCGAACGA
GATATTTGGGTTCCCGACCCGTAAAGCTCTTCCGGATCAAGATGCAGGGA
TCCGAAGCGGTGCTGGCCATGTCCAGTCGAACCTGGCTGTCGTACTACCA
CCAAAATCGATTCCATTTGACGCCTCTGTCTTATGAAACCCTTGAGTATG
CTTCTGGCTTCTCGAGCGAGCAGTGCAGCGAAGGTATCGTGGCTATATCC
ACCAACACCTTGAGGATCTTGGCCCTGGAGAAACTGGGAGCCGTCTTCAA
TCAAGTAGCGTTCCCCTTGCAGTACACTCCACGTACCTTTGTAATCCATC
CGGATACGGGACGCATGCTAATTGCCCGAACCCGATCACCACGCCTACAC
AGAGGATACGAAGAGTGCTCGAAAGGAGCAAATGGCCGGAGAGATGCGCA
GTGCAGCTGGCGATGAGAAGAGGGAGTTGGCCCGCGAAATGGGCAATGCT
TTCATCAACGAAGTCCTTCCCGAGGACGTGTTTTCGTCGCCCAAAGCAGA
CTAGGTCTTTGGGCCCGCAATCCGTGCCTGACGCCATGCATGTTCAGACG
ATGTTCGTGTGCGCCTCACCCAACGAGCCATTATGTCGATGGCCATGCTG
AGTCTCCTACCGCCGAATGCCCGGACTACTTGTGTGGAATCGCGTAAGAT
CGCAGCTGAATCCTAGAATTGCAGGCGTCTATATTCCAAATATTCATTGT
TCTACCTGGAAATTCATGTCCACCACGGACATGTGAGCG
FMO05893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13900-RC | 4329 | CG13900-RC | 1978..3055 | 109..1170 | 4515 | 95.6 | Plus |
| CG13900-RA | 4222 | CG13900-RA | 1871..2948 | 109..1170 | 4515 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 828852..829944 | 1101..17 | 4720 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:14 has no hits.
FMO05893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:26 Download gff for
FMO05893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13900-RA | 1880..2975 | 100..1177 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:39:06 Download gff for
FMO05893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13900-RB | 27..1213 | 10..1177 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:16 Download gff for
FMO05893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13900-RA | 1863..2958 | 100..1177 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:16 Download gff for
FMO05893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 828765..829951 | 10..1177 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:26 Download gff for
FMO05893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 828765..829951 | 10..1177 | 95 | | Minus |
