FMO05903.5prime Sequence
1131 bp (964 high quality bases) assembled on 2008-09-15
> FMO05903.5prime
CAGTCGACATGGATCGGACCATAATTGCACCGTGGAAGGCCGAAGAGAAG
GAGCAGAGCGAGAAGCTCCACAGGAAGCTGCAGGGACTGGCCCTGGTGCA
CCCCCTGCCGGACGAGCTGCGTAAGCTGATTGCCTGGGACATGTTCCTCA
AGCCCAACCAGGTGGCCTTCGTGCATGTGATGCACTACCTCTTCCGTCTG
CTGGATCCCGCGGAGTTCAAACGCCGCTTCTTCTGGCCCATCACCGACAA
GAAGTCGGAGGCGAACTTTCGCTCCAGCACGGTGGAGTATCTGAAGCATC
TGAACGAGAAGCACCAGCTGCATTGGGCCAACATCAAGTCGTATCTGGTG
GTGATGCCCGGAGGCATGAGGTTCATCAACTTCCTGCTCGAGTTCGTGGG
CTTCGTGATCCAGGAGCTCATCAAGCAGCGCGAGAAGTCACTTGGCTTAG
AGGCGGGAACACCAAACGTGAGCGCCAAGGTCATGGCCCGCCAAAATGCC
GTGATGAAGGAGTACGCTTCTTCGTATGTGGTCAATCTGGAGGAGAATAC
GGCCCTGTTGCGGGACAAGACCCAGAAGATCAGACGCCTGATGGCCGATC
TGTCTGCAGACATGGGAGTGCCCGAGGAGCAACTGGCGGACGATGGCTTT
CTGGATGAGTTCGAGGCCACCGCTGCACTCGGCGTGGAGCGGGTCATTAC
CCCACCCCACCGAAAGGAATTCGACCTGGAGGCATCTCTGTGCGGTCTCA
AGGAGGCCATCGATCTTTTCAGGTGAAGCAAGCCGAGAACAACCAGAGCA
AGGAGGCGGTGGAGAAGGCACTTCGGGCATGCGAGTTGCTGTTCGACTGT
GATGCAATCACAGAAGGAGATTTCTACGATCCTTTGGGCGCATCAAAAAT
GGGATGCGCTCTTAACGGCTTTAATCGGATCAGCGGCCCATTGCCGAGCA
CTGGATGCTAATGACCACACACGAATCGAATGCGTTTGTCACACCGATTT
GCAGCCTCTTCGAATGGAACTTTCACAGTCCGAAGTCAATTGACATTTCT
CCAGAAACTAAACGAACCGTCCAAAAGAAAGGAAGTGGCATGAAGTGGTC
TCGCCAGGGTACAGAACTTCACCCGGAAATC
FMO05903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dgt6-RA | 2196 | CG11881-RA | 82..1216 | 9..1126 | 4945 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29130030..29130891 | 869..9 | 4045 | 98.7 | Minus |
| 3R | 32079331 | 3R | 29129748..29129965 | 1076..868 | 515 | 90.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:26:26 has no hits.
FMO05903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:41 Download gff for
FMO05903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt6-RA | 82..1216 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:34 Download gff for
FMO05903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt6-RA | 39..1173 | 9..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:46 Download gff for
FMO05903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt6-RA | 82..1216 | 9..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:46 Download gff for
FMO05903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29130030..29130891 | 9..869 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:41 Download gff for
FMO05903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24955752..24956613 | 9..869 | 99 | | Minus |
