FMO05909.5prime Sequence
1127 bp (920 high quality bases) assembled on 2008-09-15
> FMO05909.5prime
CAGTCGACATGGCGATGCAGAAGTTCTTCAGCGTGCTGCTGCCGGATGTG
AAGCGGGAGCTGCGCCGCGGGATCATCGAGTGCTCCAAGCGGGGCCTCCT
GCACAGCACCAAGTGGCTGGCGGAAATGCATCACGGACTGGCCGATGTGC
ACATAGACAATGAGGCGCCTGATGAGGATCGCACATTCAGCGAGTGTCAG
CTGGAGGGGATTGCGCCGGAGGAGTACAGCGACTACTTCCTGGCCAAGAG
CTACTACGACGTGAGGGAGTACGACAGGGCGGCGCATGCGGTCAGGAACT
GCGAGTCCAGTGTTCCGCGCTTCCTGCACTTCTATTCCAGCTACATGGCC
AGGGAAAAGCGGCGACTGGACTCGACCACGGACCAGGCGAATCTGCACGA
ACCGAATCAGATGCGCGATCTCGCCGACCTGCTGGCTACGTTGCGCATGG
AATACGGCAAAAGTCGGCTCGATGGCTACGGAATATACTTATACGGAGTA
GTCCTGAAAGCACTGAATCTCAACCAGGCCGCCGAGCAAATGCTGGTCCA
GGCCATCAGACTGGTACCCATGCTGTGGAGCGCCTATCTGGAGCTCTCGC
CCCTCATCATGGAGAAGAAGAAACTGCTGAGCCTGCAGCTGGGTGGTCAC
TGGATGCGGCACTTTCTTCATGGCGCACACTTTACCTGGAGCTGTACCTC
AACGACGACGGCCTGAAGATCTACGAGGACCTGCAGGCATCGGGTTTCAG
CAAGAGCATCTACTTGATTGCCCAGATGGCTCTGGTCTATCACAATAAGC
GGGATGTGGACAAGGCGATTGAGCTGTACCAGCGCTTCTCGAGAGCGATC
CCTACCGCCTGGACATGTTGGACACTATTCCATCTGCTGTTCGTCAAGGA
GATGAAAACCGAAATGGCACAGTTGCCCACAAGGCTGTCAGCATCAACAA
TACCGCCCGGAGAAGTTGTTGTGTAATAGTACTACTACGGTATCCGCTTG
TGATCACAGGTGGCCTATTTCTTACTTTCACGCCCCTGAAACTGATCCCT
AGATCTCGGCGGCCTGGACCTTGATGGACTCGATTTTCGGGAGCCTATAA
CCCATGGCCCCTACCAAGACTACCGGA
FMO05909.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc23-RB | 2184 | CG2508-RB | 77..1151 | 9..1077 | 4845 | 97.7 | Plus |
| Cdc23-RA | 2270 | CG2508-RA | 77..1151 | 9..1077 | 4845 | 97.7 | Plus |
| CG31687-RB | 3653 | CG31687-RB | 77..1121 | 9..1045 | 4710 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20459418..20460390 | 9..979 | 4420 | 98.8 | Plus |
| 2L | 23513712 | 2L | 20450301..20451276 | 9..979 | 4340 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:12 has no hits.
FMO05909.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:24 Download gff for
FMO05909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc23-RA | 77..1161 | 9..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:39 Download gff for
FMO05909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc23-RA | 24..1108 | 9..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:43 Download gff for
FMO05909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdc23-RA | 77..1161 | 9..1086 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:43 Download gff for
FMO05909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20459418..20460390 | 9..979 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:24 Download gff for
FMO05909.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20459418..20460390 | 9..979 | 98 | -> | Plus |
