FMO05913.5prime Sequence
1115 bp (1022 high quality bases) assembled on 2008-09-15
> FMO05913.5prime
TTCGAAGTTATCAGTCGACATGGATACATCAAAGATTAGTGCCAGGTACT
CGAAAGTAGACCTGTTAGCTCTAAGATATGAAGGTAAAAGTCGACAGCGC
CCGCAATGTTCAACACGACTTGAATTGCAGACGCTAGGTTTTTGGAAAAT
TAATCTGAACACAGCTGCGTTAACCGTGTCCAGCGCCTATTCTAATCAAA
ACAAGAATCGACTTTCTCCAGAAGCAGATAACTCGAGCTTAATTTGTTCC
AATAGTAGCTCAATAAGTTCACGTCGCGCTATGAGAAATCGAGAACGGGC
AAACAACTATTACCAGCGCTTCGTACCTACCGATTCTCTTCTAATAAGTG
GGGAGGATAAAGATAAGGATGCGCTTTCTCATGGACAGCCCTATAAGTTG
AATATCATCGATCACCGTAGCATATCATCTTCACATTTAATGCCGGCATT
TGCAAAGAGGCGTTTTGTCATATCGAAAGGCAGCAACAGCGAGGAAAGCA
ACGAGGGGATAAACACTTGTGCAAGCAAGGGCAAGGCAGCCAGTTCGCCT
AGCCGTAAGGGTAGCGAGTTGGATACTGCTGAGACATGTTTGAATTTTGT
TCAGCCGGATCACGACCAATGCATGTCATCTTCACCTACATTTTCAACAT
CCCGCCAAGAAAGGCGGATTGGTAGCGGTCGGCTGTTGCCAAGAAGTGAT
AATTGGGATTACAAAAACGAAAAGACCGTAGAAGCCAGCATTGAGAATGA
AAAGGAAACATCTCCAATGGATCTGGAAGTACAAGCAGTCTTAATCAGCA
CAATCAAAGCCAACATCGTTCTCGAACATTCAGTGGAAGGTTAGTTGAAC
GTGTTCCCGAGGTCACAGATCGTCGTTTTCATATGACTCCAAAAGTCTTT
TGATCGTCAGGGATTTAATAATCGACGCATTTCTGGTAAGGAGCTTTCAG
TACTCAAGCCGAAGCAGGGTGGCAATTCCTATCTCATCACGAAGAACCTG
AATGGTTCAGTGCAGAGACCTAAATCCAAGCTAGAACTATTGATCTACAC
GGGTTTGGAAGACTGTGAAAAAAACGAGAGGCGATCCGTAACTGAAGTAT
AAAATATCCCAATTT
FMO05913.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4E-T-RH | 3376 | CG32016-RH | 140..1229 | 20..1104 | 5025 | 98.2 | Plus |
| 4E-T-RG | 3526 | CG32016-RG | 197..1286 | 20..1104 | 5025 | 98.2 | Plus |
| 4E-T-RC | 3691 | CG32016-RC | 362..1451 | 20..1104 | 5025 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 956832..957891 | 1097..44 | 4645 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:52 has no hits.
FMO05913.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:43 Download gff for
FMO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 358..1462 | 13..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:46 Download gff for
FMO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32016-RC | 323..1427 | 13..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:29 Download gff for
FMO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4E-T-RC | 358..1462 | 13..1114 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:29 Download gff for
FMO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 956815..957889 | 46..1114 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:43 Download gff for
FMO05913.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 977441..978515 | 46..1114 | 97 | <- | Minus |
