FMO05918.5prime Sequence
620 bp (620 high quality bases) assembled on 2008-09-15
> FMO05918.5prime
CAGTCTTTACCAAATCATATTGAAGATCTAAAATTTAGAAATTCTGATGT
TGAAACGGATGATGATCTTCACTTCCCTGGAATTGCAGCTAAAAATAAAA
TCTTGAAGCTTAGCTGGTGGCATTCTCCTGTTGATATGCATTATGTAGCG
ACAGAATCAGTGCAACCAAAAAAAAGTGATAAAGTACCGAGCAATAAAAT
TAAAAAAGTTGAGAACAATAATACTTTAGTTAATGGTTGTAGTAAAACTT
CAGCAAGATCTGTTCCATTACTCAAATATAATCGTCCAGACCAGGATGGG
GACAGCGAAGAAAACATAACAAGCGTTCTTGAGCCAAACGTTGATGAAAT
CTATTCTAAAGACTCAGAACGGCTTGTGGATGATTCAAAACCATGTATTG
GACTATTAAATCCAGATCAGGAGGATCAAATGAAAGTATGCGGTTATCGA
CGTTCTCTTATGCGAACTGGTTTTTGTTGGGCATGCATCTTCTTAACTGG
AGGTCTGTTGCGCCTCGTGTTACATTGGTGGCGTCATTTATATTTATATG
CCACTTGCTCTCAATGTTCATTGGAGGAGGCAGAACAGGTTTTTGGTAAC
AGAGGATTATCAAGGAAAGC
FMO05918.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32000-RH | 5743 | CG32000-RH | 1114..1732 | 1..620 | 3075 | 99.8 | Plus |
| CG32000-RD | 3219 | CG32000-RD | 1110..1728 | 1..620 | 3075 | 99.8 | Plus |
| CG32000-RG | 4782 | CG32000-RG | 234..771 | 81..620 | 2650 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 134583..134964 | 1..382 | 1910 | 100 | Plus |
| 4 | 1348131 | 4 | 136878..137115 | 382..620 | 1145 | 99.6 | Plus |
Blast to na_te.dros performed 2014-11-28 22:33:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 1792..1898 | 155..259 | 115 | 58.9 | Plus |
FMO05918.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:25 Download gff for
FMO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RD | 1110..1728 | 1..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:05:54 Download gff for
FMO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RH | 1110..1728 | 1..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:51 Download gff for
FMO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32000-RD | 1110..1728 | 1..620 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:51 Download gff for
FMO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 134583..134964 | 1..382 | 100 | -> | Plus |
| 4 | 136879..137115 | 383..620 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:25 Download gff for
FMO05918.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 155209..155590 | 1..382 | 100 | -> | Plus |
| arm_4 | 157505..157741 | 383..620 | 99 | | Plus |
