FMO05924.5prime Sequence
1152 bp (1020 high quality bases) assembled on 2008-09-15
> FMO05924.5prime
CAGTCGACATGATTTCCGAAGTGGACTCCATAAATAAGGATAGTTCAGTA
CGTGTTGCTGTCAGAATCCGACCTCAAAACTCGAGGGAGCTAATAGATAT
GTGTCGTATCTGCACGACCGTCACTCTTGGAGAGCCTCAGATTTTTCTTG
GATCTGACAAAGCCTTTACGTTCGACTATGTTTTTGATACCAATTCCAAT
CAGTGTGATATATACTCGGACTGCGTGGAAAAATTAGTAGATAGTACCCT
CCATGGCTATAATGCCACCGTACTCGCCTACGGGCAAACAGGATCGGGAA
AAACGTATACAATGGGCACTGGTTTCGACCACGAGTCGGAGTCATCCGAT
TCCGTTCAGCTTGGCATTATTCCACGGGCTGTTCGTCATATATTCAGTGG
TATCGAACAACTGGAGGGATCCAGCACTTCAGAACATCCAGCGGCTGGTG
GAAGTCCGCAGTTCAGTTTGGCTGTTCAGTACATCGAATTGTACAACGAG
GACATCTTCGATCTGCTGGACCCGTTCAACAAGAACAGCAACTTTAAGAT
ACACGAAGATGCCAGTGGACAAATCACAATATCTGGGGCATCGATAAAAC
CCATTTATCAACCGCATGATGCCTTAAAGTACCTTCAGCAAGGAGCATTA
GCTCGCACCACTGCATCGACAAAAATGAACGACCAGTCATCCCGCTCGCA
TGCACTGTTCACGATTTTTGTGCGCAGACAGCGACTGCTCACCCCCAGTG
ATAATGTTCCGGATAACGACCTGGAGACCCTGACCTCCAAGTTCCATTTC
GTCGACTTGGCTGGTTCGGAAAGGCTCAAAAGAACTCAGCCACTGGCGAG
CGAGCTCGCGAGGGCATATCCATAAACTGTGGACTTCTCGCACTGGGTAA
TTGCATTTCGGCGCTCGGCGACAAATCAAAGAGGGCACTGCACGTGCCCT
ATCGGGACTCTAAGCTGACGCGACTTCTGCAGGACTCACTGGGCGAAATA
GTCAGACCTTGATGATCCCTGCTGTCGCCAGGTGATCGAAGACTTCATGG
AACCACTGAATACACCTGAAGTATGCCACCAGGAGCCGAATATATAAGAA
CAAGTAGGATTACCCAGGACCGAGTTCCGGAACATTCGCAGCTGCGATAG
GA
FMO05924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp31E-RE | 3843 | CG5300-RE | 134..1278 | 9..1146 | 5250 | 98 | Plus |
| Klp31E-RC | 3826 | CG5300-RC | 114..1258 | 9..1146 | 5250 | 98 | Plus |
| Klp31E-RB | 3725 | CG5300-RB | 13..1157 | 9..1146 | 5250 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10414980..10415411 | 200..631 | 2160 | 100 | Plus |
| 2L | 23513712 | 2L | 10415470..10415925 | 629..1082 | 1930 | 97.8 | Plus |
| 2L | 23513712 | 2L | 10414777..10414919 | 61..203 | 715 | 100 | Plus |
| 2L | 23513712 | 2L | 10414602..10414657 | 9..64 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:35:43 has no hits.
FMO05924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:05 Download gff for
FMO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RB | 13..1084 | 9..1078 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:43 Download gff for
FMO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RA | 117..1188 | 9..1078 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:54 Download gff for
FMO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp31E-RB | 13..1084 | 9..1078 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:54 Download gff for
FMO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10415470..10415921 | 629..1078 | 98 | == | Plus |
| 2L | 10414602..10414657 | 9..64 | 100 | -> | Plus |
| 2L | 10414781..10414919 | 65..203 | 100 | -> | Plus |
| 2L | 10414984..10415408 | 204..628 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:05 Download gff for
FMO05924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10414602..10414657 | 9..64 | 100 | -> | Plus |
| arm_2L | 10414781..10414919 | 65..203 | 100 | -> | Plus |
| arm_2L | 10414984..10415408 | 204..628 | 100 | -> | Plus |
| arm_2L | 10415470..10415921 | 629..1078 | 98 | == | Plus |
