FMO05932.5prime Sequence
1147 bp (969 high quality bases) assembled on 2008-09-15
> FMO05932.5prime
CAGTCGACATGAGCACTTTTAAGCCAAAGTTCCTAAAACCCGAGACGGAC
GATGCAATCACAGATAGTGCCGGTGGTGAACAGCAGTCCTCCGCCTTTGT
ATTCAATGTCAATCACAATATGGGACTCATGGAGCAGAGGGAACGTTTGC
CCATTCGTCAGTACCGGGATCAAATACTTTACTGCTTGGAAAAGCATCAA
GTGGTCATACTAGTGGGTGAAACAGGCAGTGGCAAGAGCACCCAGGTGCC
ACAGTATTTGTATGAATGGGGCTGGCACACCAAGGGACTCATTGGCATCA
CCGAACCACGACGCGTTTCCACCGTTACGCTGGCTAATCGCGTGGCACAG
GAACGCGGCGAACTGGTAGGTGACACGGTGGGCTATGTAGTTCGCTTCCT
GGAAAGCATGAGCTCCTGTACCAAAATCAAGTTCATGACCGAGGGCATCT
TGCTGAGGGAAGTCCTAGCCGATCCGCTGCTCACCCAATATGGTGTTATC
ATCGTGGACGAGGCGCACGAGCGGAATATGCTCACCGACATGATTTTGGG
ACTGCTCAAGAAGATCCTTCGCAAACGCAGCTCGCTCAAGCTCATCATTT
CATCGGCCACCATAGATGCAAGCTTCTTCAGCGAGTTCTTCAGCTGGCCA
GGATCGGGCGAAGTGAGCGTTAAGCTAAGCATTTGAAGGTCGCATGCATC
CTGTGAGTAATTTCTATCTGAACGAACCCTGCGCCGATTATGTGAAGGAA
ACTGTGGAGACCGTCTGGAAACTGCATCAAAGGAGCCGGCCTGGCGACAT
TTTGGCCTTCCTAACTGGGCAGGAGGAAGTCCTGGAGGCGCTGGATCTTC
TGCGCCAATACATCGCAGTCGGAACAGGAGAATCTCAAGGGCTGCCCATG
TATGGAGTATGTCGAGCACTGATCAGTGTCGTATTCTTTACCCCGCCCAA
AGGAACCGCAAGTGGTGCTGCCACGAATAAGCAAAACCTCCATCCCCATT
CCGGGCATGGTTATGTGATGACTGCGGCTACCTCAAGGTAAAATGGTACA
TCCAAACCTGCATGACAGTTTGGTATTAGTCCCGTTTACCATGGCGCTCG
GCATCAAAAGACAGGACAAAGCGTGCTTAGTGGCTCCCGTCAGGCTA
FMO05932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3225-RA | 2387 | CG3225-RA | 80..1173 | 9..1085 | 4845 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4816925..4817663 | 1050..324 | 2845 | 96.1 | Minus |
| 2L | 23513712 | 2L | 4818038..4818166 | 137..9 | 645 | 100 | Minus |
| 2L | 23513712 | 2L | 4817720..4817818 | 325..227 | 495 | 100 | Minus |
| 2L | 23513712 | 2L | 4817882..4817976 | 229..135 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:06:00 has no hits.
FMO05932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:23 Download gff for
FMO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 80..1173 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:50 Download gff for
FMO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 45..1138 | 9..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:29 Download gff for
FMO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3225-RA | 80..1173 | 9..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:29 Download gff for
FMO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4816925..4817663 | 324..1050 | 97 | <- | Minus |
| 2L | 4817722..4817815 | 230..323 | 100 | <- | Minus |
| 2L | 4817882..4817973 | 138..229 | 100 | <- | Minus |
| 2L | 4818038..4818166 | 9..137 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:23 Download gff for
FMO05932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4816925..4817663 | 324..1050 | 97 | <- | Minus |
| arm_2L | 4817722..4817815 | 230..323 | 100 | <- | Minus |
| arm_2L | 4817882..4817973 | 138..229 | 100 | <- | Minus |
| arm_2L | 4818038..4818166 | 9..137 | 100 | | Minus |
