FMO05933.5prime Sequence
1150 bp (1055 high quality bases) assembled on 2008-09-15
> FMO05933.5prime
CAGTCGACATGTCGAAGCCCCAATCCGACGCCGATCGGCGCAAACAGATC
TCGGTGCGCGGGATCGCCGAGGTGGGCAATGTCACCGAAGTGAAGAAGAA
CTTCAATCGCCACCTGCACTACACCCTGGTCAAGGATCGCAATGTGTCCA
CCCTGAGGGACTACTACTTCGCCCTGGCCAACACCGTCAAGGACAACATG
GTGGGCCGCTGGATTCGCACGCAGCAGCACTACTACGAGAAGGATCCCAA
GCGCGTCTACTATCTGTCGCTGGAGTACTACATGGGTCGCTCACTGACCA
ACACCATGATCAACCTGGGAATCCAGAGCGAGTGCGAGGAGGCCATGTAC
CAGTTGGGTCTGGATATCGAGAACCTGGAGGAGATGGAGGAGGACGCCGG
TCTGGGCAATGGTGGTCTGGGTCGTTTGGCCGCCTGTTTCCTCGACTCGA
TGGCCACTCTGGGTCTGGCCGCCTATGGCTATGGCATCCGTTATGAGTAC
GGTATCTTCGCCCAGAAGATCAAGAACGGCGAGCAGGTGGAGGAGCCCGA
TGATTGGCTGCGTTATGGCAATCCCTGGGAGAAGGCTCGTCCGGAGTTCA
TGCTGCCGGTCAACTTCTACGGCCGTGTGATCGACACGCCCGAGGGCAAG
AAGTGGGTGGACACCCAAAGGGTGTTTGCCATGCCCTACGACAACCCCAT
TCCCGGATACAACAACAACCACGTAAACACGCTGCGTCTGTGGTCCGCCA
AGTCGCCCATCGACTTCAACCTCAAGTTTCTTCAACGATGGTGACTACAT
CCAGGCCGTGCTGGACCGCAATCTGGCTGAGAACATCTCACGTGTCCTGT
ACCCCAACGACAACTTCTTCGAGGGCAAGGAGCTGCGTCTGAAGCAGGAA
TACTTCATGTGCCGCCGCCACGCTGCAAGATATTATCCCGCCGCTACAAG
GCCTCGAGTTCGGATCCCGGGAGGCCGGTCCGCATCACTTTCGATCACTT
CCCGACAAGGTGGCCATTCAGCTGAACGATACCATCCATCGCCTGGCCAT
CCCTGAACTGAATGCGCAATCTGTCGATGAAGGAACTCTTGACCTGGAGA
AGGGCTGGGACATTCACCGTAGGAGTTCGCCGTCCCAAACAAATCGTGCC
FMO05933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlyP-RB | 2891 | CG7254-RB | 199..1316 | 8..1127 | 5085 | 97.7 | Plus |
| GlyP-RA | 3144 | CG7254-RA | 199..1316 | 8..1127 | 5085 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2134437..2134965 | 250..778 | 2645 | 100 | Plus |
| 2L | 23513712 | 2L | 2131011..2131254 | 8..251 | 1220 | 100 | Plus |
| 2L | 23513712 | 2L | 2135038..2135316 | 782..1061 | 990 | 95.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:57:58 has no hits.
FMO05933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:47 Download gff for
FMO05933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlyP-RA | 196..1269 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:51 Download gff for
FMO05933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlyP-RB | 194..1267 | 1..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:34 Download gff for
FMO05933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlyP-RA | 196..1269 | 1..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:34 Download gff for
FMO05933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2131008..2131254 | 1..251 | 98 | -> | Plus |
| 2L | 2134439..2134967 | 252..781 | 99 | -> | Plus |
| 2L | 2135038..2135335 | 782..1080 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:47 Download gff for
FMO05933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2131008..2131254 | 1..251 | 98 | -> | Plus |
| arm_2L | 2134439..2134967 | 252..781 | 99 | -> | Plus |
| arm_2L | 2135038..2135335 | 782..1080 | 94 | | Plus |
