FMO05934.5prime Sequence
1159 bp (1020 high quality bases) assembled on 2008-09-15
> FMO05934.5prime
CAGTCGACATGACAAAAATAAAGAATCTGCTGAGTTTTGTGACCCAGTCA
CGGGCCATATCGCACACCAATCCCAGGGAACATATACTTAACTGCCTGAC
CTATGGGCTACTAGTCATTGTGGCGCTCTGCGCGGGTTTTCTGCTTTGGG
ATCTCTCCAGCAGCCCACGGGATGGATTCTTCCATGGGAAAAGGGACTCG
CACACATTAATCCTCGACCTGGAGCACATCCAGGAGCTTGCCGTAAATCC
GGAGGCCGAACAGCGGGCACGGAATGTAAACTGCACCTTCTGGGACTGCC
TGAACATCTACAAATGCGAGCACGACCGCCTAAAGGTCTACATCTATCCG
CTGCAGGAGTTTGTTGACGAGCAGAGCGACAAAACGGCCACCACCCTGTC
CAGCGAGTACTTCCAAATATTGGAGGCGGTACTAAAGAGTCGCTACTACA
CGTCCAATCCGAACGAAGCGTGCCTCTTTCTGCCCAGTTTGGATCTCCTG
AACCAAAATGTCTTCGACAAGCACTTGGCGGGCGCTGCCTTGGCTTCACT
GGACTTCTGGGATCGTGGTGCCAACCACATCATCTTTAATATGCTGCCCG
GCGGAGCTCCATCCTATAACACTGTGCTGGATGTGAATACGGATAATGCC
ATCATTTTTGGCGGTGGCTTTGACTCTTGGTCTTATCGCCCGGGCTTTGA
TGTCGCCATTCCAGTCTGGAGTCCACGATTGGTGCGACAACATGCACATG
CGACGGCCCAGAGGAAGTTCCTATTGGTAGTAGCCCAGCTGAACATTCTT
CCGCGCTTTGTGAGGACTCTGAGGGAGTTATCTCTGGCTCACAGCGAGCA
ATTGCTTCTTTTGGGAGCCTGCGAGAACTTGGATCTCACAATGCGCTGCC
CTTTGTCGCAGCACCACAAATCGCTGGAGTATCTCGGCTGCTGTCTCGCG
GTAAATTTGCCTGCTAGTCGTAGTCTTCCCATGGGTCAACCCGATCTAGT
AGAAATTAATGTCCTCAGCACTGTATCCCGTATTGCCGTGGACAACTATG
TGCTACCCTTCCAAAATGTGATTGATTGTCATTGGCTCGTCGTATCCCGA
AAACGAACTGCATTCCGTAATGCCAAGTCTAAAGCAAATCCATGGTTAAG
AATGTTGAA
FMO05934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ext2-RB | 2694 | CG8433-RB | 63..1223 | 9..1159 | 5255 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16147535..16148657 | 1123..9 | 4975 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:39:55 has no hits.
FMO05934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:50 Download gff for
FMO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ext2-RA | 851..1999 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:06:00 Download gff for
FMO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10731-RA | 828..1976 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:18 Download gff for
FMO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ext2-RB | 56..1204 | 1..1140 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:18 Download gff for
FMO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16147531..16148664 | 1..1126 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:50 Download gff for
FMO05934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12035036..12036169 | 1..1126 | 97 | | Minus |
