FMO05966.5prime Sequence
1174 bp (1062 high quality bases) assembled on 2008-09-15
> FMO05966.5prime
CAGTCGACATGGATATAGAAGAGCTGTTCGACTGTTTTGATGAAGTGACG
CCGTCGGTGCCGCCACCAGCACTTAACCAGGAGGAGAAGCCATCGGGAAG
CAGTGCCTCCAAGAAAGGAAATAAGCGCCAAGCGGATGGCACCACTGCAT
CGAAAGAAGCTACATCCTCCAAAGGAGCGGAGGGCGATGACAAAGGAGAC
GTCACTGAGGAGCCCACCAAGCGTCTGAAGCAGGAGGCGTCAACGGTTGC
GGTGGATGACGATAATAATGCAGATGACGAACCCACTCGTACCCTCGACA
TAGACGATTCCGCGACTCTGGAGGCCCTGCGGACCAGGATTGTCACGCAC
TTGTTGGACGCTCCCAAGTCATGCACCCACGAGGTTGCCGCCCATCCCGA
CCAGGAGTACATACCCCTAAAGCCGTTCAGCGGCGTGCCTGCAAAGGAGT
ATCCCTTCGTCCTCGATCCGTTCCAGCGCCAGGCGATTCTGTGCATTGAC
AACAGCCAGAGTGTGCTGGTTTCCGCCCACACGTCAGCCGGTAAGACGGT
GGTGGCGGAGTATGCCATTGCAAAATCATTGGCCGCCAAGCAGCGGGTTA
TATACACCACTCCCATCAAGGCTCTGTCCAACCAGAAGTTTCGCGAATTC
ACCGACGAGTTTAAGGACGTGGGCTTGGTCACCGGTGATGTGACCATAAA
TCCATCGGCCTCCTGTTTGATCATGACCACCGAGATTCTGCGAAACATGT
TGTACCGCGGTAGCGAGATCATGCGCGAGGTGGGCTGGGTGGTCTTCGAT
GAGATTCACTACATGCGCGACAAGGAGCGCGGCGTCGTCTGGGAAGAAAC
GCTCATCCTTCTGCCGGACAACGTGCGATATGTCTTTCTTTCGCCACCAT
TCCCAATGCTCGACAATTCGCCGAGTGGGTCTGCCACCTGCACAAGCAGC
CATGTCACGTGTCTACACCGATTATCGTCCACTCCCTCTGCAGCACTAAT
CTTCCCGGCCGGTGGCGATGGCCATCATCTTATCGTCGATGAAAAGGGCA
GTTCAGAGACCACTCACCACAGCAATGCAGATGCTGGCCATGCAGGGGAG
CCGCAAGGGAATCGAAAAGACCCATGGGGGCATAGGACCATGCCCGACAA
CGAATCTTTAAGTACAGATATATG
FMO05966.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)35Df-RA | 3585 | CG4152-RA | 94..1233 | 8..1133 | 5180 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15752356..15753399 | 8..1048 | 4965 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:54 has no hits.
FMO05966.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:05 Download gff for
FMO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 90..1244 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:06:14 Download gff for
FMO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 100..1254 | 1..1140 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:19 Download gff for
FMO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Df-RA | 90..1244 | 1..1140 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:19 Download gff for
FMO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15752352..15753452 | 1..1095 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:05 Download gff for
FMO05966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15752352..15753452 | 1..1095 | 98 | -> | Plus |
