FMO05970.5prime Sequence
1170 bp (1023 high quality bases) assembled on 2008-09-15
> FMO05970.5prime
CAGTCGACATGGCTGGAGATGATCTGATTGCGAAATTCCAGGCGCTCGGC
ATGAGCGAGCAAAAGGCGAAGGAAACTTTGAAGAATGCCAACGTGACAAA
GAATCTCCAGCTGTCGCTGGCGGCGGCGGGAAGCGCCACCCTATCCGACG
GCACTGGTATGCTGATCTACCACATGGCTACCAAGCTGAAGCCGCAGACT
GCGGACCATCTGCCTCTTCTGGTGCGCTACATAGTGGAGCACAAGCTGGA
CAACACTCAGCGCGTTGATGCCGCCCTGGAGTACCTGCTCAAGTGCGGTC
AGAGCCTGAATGCCAACATAGATCTGCAGGCGCTTGAGAAGGAGTGCGGC
GTTGGAGTGGTGGTCACTCCGGAGCAGATCGAGCGCACTGTGCAGGCCAA
GATCAAGGCCAGCTACAAGGAGGCCTTGTTGGAGCAACGCTACCATTTTA
ACTCTTTTAAAATCCTGCAAGATGTCCGGGGAGAACTCAAGTGGGCGGAT
GCCAAGTCCGTGAAGGCGGCCATCGATGTGGAGATCTTCGATCTGTTGGG
TCCCAAAACAGAAGCAGACTTGAAACCTCAGACAAAAGCAAACGATAAGC
CGAAGGCTGCAAAACCGAAAGCTGAAGTAACTCCTGCCGCTCAAACGGCT
GAAGCTGCATCCGATGGAGCCACCACCATTTCGGAACTCATGAAAACCAA
GGTACACTTCCATGCTCCCGGAGAGAACTTCAAGGCAGATGGCTACGTGG
TCACCGAGCACACGGAGCGGCTACTAAAGGAGCACCTGGCGAGAACTGGA
GGCAAAGTGCACACACGATTTCCGCCAGAGCCGATGGCATCCTGCACATC
GGTCACGCAAAGGCTATTAACATTACTTTGGATACGCGGCTGCCCACGAT
GGAGTCTGTTACTTGCGCTACGACGACACCAATCTCGAGAAGGAGGAGGA
GAAGTTCTTTTTTGGCCATCAAGGAGATGGTGGAATGCCTGGGCTACAAC
CATTCAGGATCACTTACTCCTCGGAAACTTTCAGCAGCTGGTACGAGTGG
GCTGGTGTGGCTGATTACAAGGATTGGCCTACGTGTGTTCCCAGAAAGGC
GGAGGAACTGAAGGCCTCAATCCGAGCCCACCCTTGGAGGGACGTTCCAT
TGAGGATTCATTCGCCTTTT
FMO05970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gln-RA | 2455 | CG10506-RA | 48..1205 | 9..1160 | 5295 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25264517..25265674 | 1160..9 | 4965 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:17 has no hits.
FMO05970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:01 Download gff for
FMO05970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 41..1213 | 1..1167 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:23 Download gff for
FMO05970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 41..1213 | 1..1167 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:44 Download gff for
FMO05970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gln-RA | 41..1213 | 1..1167 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:44 Download gff for
FMO05970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25264505..25265681 | 1..1170 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:01 Download gff for
FMO05970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21090227..21091403 | 1..1170 | 97 | | Minus |
