FMO05980.5prime Sequence
1190 bp (1036 high quality bases) assembled on 2008-09-15
> FMO05980.5prime
CAGTCGACATGGAAATAGCAGAGATATCTGCAGAAGATGAGGATGTGTTT
CACTTTGAGACCGAGCACCTGGCCCTGCGTGGCAACCAGTGCTATACCAA
TTTGCTGCGCACTTTGGCCGTGCTGCAGGCACAAAGGATTCGGGTGCATC
AGCAGATTGAGGAATTGGAAGCCACACAAAATATCTACTTGGAGAATCCG
CAACATATGCTGGACAAACTGCGAAACAACGAGCCTTTGATAGCGGATAA
TTACATCACCACGACCGTTCTACCGGACTTGCCAACTCTGTCGCCCAATG
ACGAGGAAGGGGGCACAAATGAGACACCGACCGATGCGTCTTCATGGACG
CAAGAGGCGAACAAGAATCGGGACAGGAGCAATGGACGGTCGGAGAATTT
CAATCGCTTGTGGACCAACGAAGAGCAGAGTCGCTTGGAGCAGCTGCTCA
TCCAGTATCCGCCAGAGGAAGTGGAAATGCGCAGATTCGGGAAGATAGCG
AAGGCCTTGGGCAACAGAACGGCACAGCAAGTGTATAGTCGTGTCCAGAA
GTATTTCCAAAAGCTGCACGATGCCGGAATGCCTGTGCCCGGTCGCATAC
CCAAGCATCGACGTCCTGGTTTGAGTAAGCCGAAGATCAAACTTCGCAAG
TCAACCTTCTTCCCCGCTCATAATATATCGCTACAAATGCCAGAGGACGA
TTTCACATTTGACGACCTGCGAATCCCATCGCCTGCGAGCGATATGCTCC
TTATGCCGGCATCCAAGATCGAACCAAAGATCGAATCCGAGTACATGGAT
GCCGATCTGAATGCGGAGTCAAAGCGAAACAGGAACTATGCCTTAAGCTT
CTATCAGCCATTCAGGACGAGAACGGGAAATGGAGGACGGATATGAGCCA
GACTTGCTGGCCGCCAAGTTGTGCCGAGTGCGAAGAGCCATCTGTGACCA
GGACCCAATGGCGTTGTTAACAGTTGTTATTGTTACCTTAATCTGTGCGG
AGAATTGCCTGGCCAGTCAGCTATCGAAAGGCGTTTCAGCATTTAAGTCT
ATGAAGTGTTAGTGGACCAGGAGTCAAGCAGCTTCTATGACCATTTCGTT
GGGCCGGCGGGCCAAGTTAGTGGCCCATAATCCATATCATATCATAAACC
TAATCCACACTAGGCTAAGAGAATCTCGGGCCATGACTAT
FMO05980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atac1-RA | 1230 | CG9200-RA | 76..1143 | 9..1076 | 5085 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6959186..6960253 | 1076..9 | 4885 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:24 has no hits.
FMO05980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:17 Download gff for
FMO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 73..1150 | 3..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:37 Download gff for
FMO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 21..1098 | 3..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:37 Download gff for
FMO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atac1-RA | 73..1150 | 3..1083 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:37 Download gff for
FMO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6959240..6960256 | 3..1023 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:17 Download gff for
FMO05980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6959240..6960256 | 3..1023 | 99 | | Minus |
