FMO05988.5prime Sequence
762 bp (750 high quality bases) assembled on 2008-09-15
> FMO05988.5prime
CAGTCGACATGTTGAACAATATTTTAAAAACATCCAGGCAGGTGCTTTAT
CCCGTAGCAAGGACTTTCAGCCGCAGCGGCAACCACGGCAATGTGGTGAC
CGAAGCCGCTGCGACAGTGGGCGCACCTCCGGCCACAAGATCACCCCTTA
TTCTGCCGCAAGATTACACAGATTGCTTGCCGGTGAGCAGGAACACGGCG
CGCCAGGCATGGATTGAGAACACGGATGCTGTGGCGGAGCGAAAGGTTGG
CCTGATTGAACTGCATCCGGATGTCTTTGCCGCCCAGCCGCGCGTGGACA
TCATACAGGAGAATGTGGAGTGGCAGAGCAAGTATCGTTATGTAAGCATG
GCGCACACCAAAACTCGAGCGGAGGTGCGCGGTGGTGGTCGGAAGCCGTG
GCCCCAAAAGGGAGGTGGTCGTGCCCGCCACGGTTCCCTCCGTTCGCCCA
TGCTGAAGGGCGGCGGCGTATTGCACGGACCCAGGTCGCCTACGACCCAT
TTTTACATGCTGCCCTTCTATAAGAGGGTTTTAGGATTGACCTCCACGCT
GAGTGTTAAGCTGGCCCAGGATGATCTGCACATCATCGATAATGTGGACA
TACCCACCGGAGATGCAGAGTTCCTTAAGGATTTAATCGCCGAACGGAAT
TGGGGACCTTCTGTTTTGATTGTAGACAAAACCATATGTTCCCCGCCAAT
ATTTGCCAGGCTAGCATGATCTGGGCTATGTCAACCTGATGCCAACCTTT
GGCTTGAACGTC
FMO05988.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL4-RA | 1012 | CG5818-RA | 51..806 | 9..762 | 3700 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16328414..16329082 | 677..9 | 3330 | 99.9 | Minus |
2L | 23513712 | 2L | 16328265..16328347 | 762..681 | 365 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:14 has no hits.
FMO05988.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:50 Download gff for
FMO05988.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL4-RA | 44..806 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:46 Download gff for
FMO05988.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL4-RA | 40..802 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:18 Download gff for
FMO05988.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL4-RA | 44..806 | 1..762 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:18 Download gff for
FMO05988.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16328265..16328347 | 681..762 | 98 | <- | Minus |
2L | 16328408..16329088 | 1..680 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:50 Download gff for
FMO05988.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16328265..16328347 | 681..762 | 98 | <- | Minus |
arm_2L | 16328408..16329088 | 1..680 | 98 | | Minus |