FMO05990.5prime Sequence
689 bp (-51 high quality bases) assembled on 2008-09-15
> FMO05990.5prime
AAAAAAGAAGTTATCAGTCGACATGGAGATGCTACCCAACCAAACGATTT
ACATCAACAATCTGAACGAGAAGATCAAGAAGGAGGAGCTAAAGAAGTCG
CTCTATGCGATTTTCTCGCAATTCGGCCAAATTCTGGACATTGTGGCCCT
AAAAACGCTCAAAATGCGCGGCCAGGCATTTGTGATCTTCAAGGAGATCG
GCAGCGCTTCGAATGCCCTGCGCACCATGCAGGGCTTCCCGTTCTACGAC
AAGCCCATGCAGATCGCCTACTCCAAATCCGATTCGGATATTGTGGCCAA
GATAAAGGGTACCTTCAAGGAGCGCCCCAAGAAGGTCAAGCCACCAAAAC
CAGCGCCGGGTACCGATGAGAAGAAGGACAAGAAGAAGAAGCCGAGCAGC
GCCGAGAACTCGAACCCGAACGCACAGACCGAGCAGCCGCCGAACCAGAT
CCTCTTCCTCACCAATCTGCCCGAGGAGACCAACGAGATGATGCTGTCCA
TGCTGTTCAATCAGTTCCCCGGCTTCAAGGAGGTGCGTCTTGTGCCGAAT
CGTCACGACATCGCCTTTGTGGAGTTCACCACCGAGTTGCAGAGCAATGC
CGCCAAGGAGGCGCTGCAGGGCTTCAAGATTACGCCGACGCACGCCATGA
AGATAACGTTTGCCAAGAAAGGCAAGCTTTCTAGACCAT
FMO05990.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| snf-RA | 835 | CG4528-RA | 113..759 | 23..669 | 3220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5309354..5309707 | 23..376 | 1770 | 100 | Plus |
| X | 23542271 | X | 5310132..5310425 | 376..669 | 1455 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:59:34 has no hits.
FMO05990.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:57 Download gff for
FMO05990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snf-RA | 109..764 | 15..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:48 Download gff for
FMO05990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snf-RA | 104..759 | 15..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:01 Download gff for
FMO05990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snf-RA | 109..764 | 15..675 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:01 Download gff for
FMO05990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5309350..5309706 | 15..375 | 98 | -> | Plus |
| X | 5310132..5310430 | 376..675 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:57 Download gff for
FMO05990.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5203383..5203739 | 15..375 | 98 | -> | Plus |
| arm_X | 5204165..5204463 | 376..675 | 98 | | Plus |
