FMO05993.5prime Sequence
636 bp (636 high quality bases) assembled on 2008-09-15
> FMO05993.5prime
CAGTCGACATGAATAAAATTACGAGTGCCTTCATAAGAGTTCTGCGCCAG
AGCAGCTCCTCAGGCGGCACAGGCAACCTTCTGGGTCGTCAGCTCTCCTA
CAAGAGCGATTTATCCCTGGACAAGATCTATCCCGGCGCCCGACTGCAAA
TCTACACGCCGCCCCCGCCGCCCAGTGGCAGCGACAAGTTCAGCGGCTTC
ATTCCCATGGACCGACTGGAGATCACCTACAGCAGGAGCTCCGGACCCGG
TGGTCAGCACGTGAACACGGTGAATACCAAGGTGGATGTACGCTTCAAGG
TGGCACAAGCGGACTGGATACCCGAGCAGACGCGCCAGAAGCTGCTCAAG
GTGCTGGCAAACCGGATTACCAAAGACGGCTACTTTTACATCAAGAGTGA
TCTTACGCGCTCCCAGCAAATGAACCTGGCCGATGCGCTGGAGAAGCTGC
GCACCATCATACGCTCCCAGGAGGCTGTGGCACCTGCGCCACCCAGCGAG
GAGACACTGGAGAAGCTGCGCAGGCGCCAGGAGCGAGCGGTCCGCGAACG
TCTACAACTGAAACGTGGTCGCGCCCAAGTCAAAGCGGATCGGCAGGGAC
CGAGCGGATTAGACTTGGCAAGCTTTTCTAGACCAT
FMO05993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6094-RB | 889 | CG6094-RB | 114..722 | 9..617 | 3045 | 100 | Plus |
| CG6094-RA | 735 | CG6094-RA | 74..682 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10507418..10507865 | 170..617 | 2240 | 100 | Plus |
| 2L | 23513712 | 2L | 10507194..10507355 | 9..170 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:36 has no hits.
FMO05993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:14 Download gff for
FMO05993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 68..689 | 1..627 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:52 Download gff for
FMO05993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 72..693 | 1..627 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:58 Download gff for
FMO05993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6094-RA | 68..689 | 1..627 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:58 Download gff for
FMO05993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10507188..10507355 | 1..170 | 97 | -> | Plus |
| 2L | 10507419..10507872 | 171..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:14 Download gff for
FMO05993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10507188..10507355 | 1..170 | 97 | -> | Plus |
| arm_2L | 10507419..10507872 | 171..627 | 99 | | Plus |
