FMO05994.5prime Sequence
985 bp (843 high quality bases) assembled on 2008-09-15
> FMO05994.5prime
CAGTCGACATGAGTGCTCCTCGAGTGGGTGGCGTATTAGCTTTGGGTGCC
ACCGCCCTGGGCGCCTTTTATCTGGGCACCCACGTGGAACGCGAACGCCA
GCACAATGGCTCCACAAGTGGCCTTCCGCGGCTGCCTGGTCTGCCCACCT
TTGGAACTGTTTCGGCTGCCAGTTTGATTCCCGCCCAAGAGAACAATGTA
AGCTTGACGGCAACTCCGTCTCGGATCGGACAGATCATGAAGTATGGATT
TCCCGGACTCGATCACGTGCGCTCCCATTCGGACTACGTGCTGTCTTACG
ATCGGAGGAACCGGGTGCCCCACTGGGTGTTCGAGCACCTTACGGCAGAG
TCGGTGGCGAAGAACGATGCCGTGGACAGATCGAAGTGCGATTTCAAGCA
GGACGAGAGCATCCATCCGTTCTTCAGGTCACAGAACACGGACTACCGAC
GATCGGGCTATGATCGCGGGCACATGGCCGCCGCTGGAAATCACCGACTG
CACCAGAAGCACTGCGACGAAACCTTCTACCTATCGAACATGGCGCCACA
GGTGGGCCAGGGCTTCAACCGGGATGCCTGGAACACGCTGGAGGCACACG
TGCGCAGACTGACCAAGACCTACTCCAATGTGTACGTCTGTACGGGTCCA
CTGTACCTACCGCACAAGGAGGACGATGGGAAATCGTATGTCAAGTACGA
GGTCATCGGCGCCAACACCGTGGCCTGTTCCCACCCACTTCTACAGGTTA
TTGTGGGCGAGTCCGCGGACCACAAACTCCACATGGAGTCTACGTGATGC
CCATCAAGTGATCAGCAACGACACTCCCATCGTGTGTTCAGGGGCCGCAG
AGAACGGGAACGCTCGGCGGGATTGCTCTTCTTCGATCAATCAATCGCAG
CACTAACCCCATAATGGCAAAAAGTCGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCAGGTAGTGTCATAATCATATCAT
FMO05994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| EndoG-RA | 1124 | CG8862-RA | 81..1010 | 9..926 | 4260 | 98.2 | Plus |
| Tengl2-RA | 1018 | CG32463-RA | 476..576 | 471..571 | 250 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12177586..12178473 | 890..9 | 4000 | 98.8 | Minus |
| 2L | 23513712 | 2L | 2238746..2238846 | 571..471 | 250 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:35 has no hits.
FMO05994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:26 Download gff for
FMO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EndoG-RA | 73..1010 | 1..926 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:41 Download gff for
FMO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8862-RA | 50..987 | 1..926 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:43 Download gff for
FMO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| EndoG-RA | 73..1010 | 1..926 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:43 Download gff for
FMO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12177586..12178481 | 1..890 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:26 Download gff for
FMO05994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8065091..8065986 | 1..890 | 98 | | Minus |
