FMO05995.5prime Sequence
1147 bp (966 high quality bases) assembled on 2008-09-15
> FMO05995.5prime
CAGTCGACATGCCACAACCGAAGCCATACGAGAGGCCCGCGGACTTCATC
GATCCCGGCAAGCCGTCCAAGTGCAAATGGCATCTGGGTACAGCCGAGAA
GTCGCCCCACATCCATCGGGGCATCGCCCACCGCCAGCAGATTACGCCCA
ACATCCTCGAGGTGATCGGATGCACGCCACTGGTCAAGTTGAACAACATT
CCCGCCAGCGACGGCATCGAATGCGAGATGTATGCCAAGTGCGAGTTCCT
TAATCCGGGTGGATCAGTGAAGGACCGCATTGGGTACCGCATGGTGCAGG
ACGCCGAGGAGCAGGGCCTGCTCAAGCCAGGCTACACCATCATCGAACCA
ACGTCTGGAAACACGGGCATTGGACTGGCAATGGCCTGTGCCGTTAAGGG
ATACAAGTGCATTATCGTGATGCCGGAGAAGATGTCCAACGAGAAGGTGT
CCGCGCTGCGAACCCTCGGGGCCAAGATCATACGTACTCCAACGGAGGCA
GCCTACGATTCGCCGGAGGGACTGATCTACGTTGCTCAGCAGCTGCAGCG
GGAAACGCCCAACTCGATTGTCTTGGATCAGTATCGCAACGCTGGCAATC
CGCTGGCTCACTACGATGGCACTGCCGCCGAGATTCTGTGGCAGCTGGAC
AACAAGGTCGATATGATAGTGGTCTCGGCGGGAACGGCGGGAACTATCAG
TGGTATTGGGCGTAAAGATCAAGGAGCAGGTTCCCAGTTGCCAGATAGTC
GGCGTGGATCCCTATGGCTCGATCCTTGCCCGCCCTGCTGAGCTCAACAA
GACCGATGTGCATTTCTACGAGGTGGAGGGCATCGGCTACGACTTTCCGC
CCACCGTATTCGATGACACCGTCGTGGATTGTGTGGACGAAAAATCGGCG
ACTCAGACTGTTTCCCCATGAGCAGAACGCTGAACGCGGAAGGAGGGTCT
GTTTGTGCGGCGGGTCCAGTGGCGGAGCGATGCACGCTGCCCTCGAGCAT
GCCCGCCAATTGAAGAAAGGCAACGGTGCGTGGTTCATTCTGCCCGATGG
CATACGCCAACATAATGAACAAGTTCCGTGTCCGAACAACTGGATGAAGG
CGCGCCAACTTTCAAGGACCGGGTAACCAGCACGGTCCATGGGGGTG
FMO05995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cbs-RC | 1788 | CG1753-RC | 92..1221 | 9..1147 | 5110 | 97.5 | Plus |
| Cbs-RB | 1990 | CG1753-RB | 294..1423 | 9..1147 | 5110 | 97.5 | Plus |
| Cbs-RA | 1911 | CG1753-RA | 215..1344 | 9..1147 | 5110 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21047557..21048377 | 232..1057 | 3695 | 98.4 | Plus |
| X | 23542271 | X | 21047190..21047412 | 9..231 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:57:12 has no hits.
FMO05995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:33 Download gff for
FMO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbs-RA | 208..1322 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:42 Download gff for
FMO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1753-RB | 287..1401 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:29 Download gff for
FMO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbs-RA | 208..1322 | 1..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:29 Download gff for
FMO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21047181..21047412 | 1..231 | 98 | -> | Plus |
| X | 21047557..21048441 | 232..1126 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:33 Download gff for
FMO05995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20918208..20918439 | 1..231 | 98 | -> | Plus |
| arm_X | 20918584..20919468 | 232..1126 | 97 | | Plus |
