FMO05996.5prime Sequence
1141 bp (911 high quality bases) assembled on 2008-09-15
> FMO05996.5prime
GCCTTAATGTGCCGGAGATGCTGCTCCAGCCGGCCCGGTTGGCCTTCTGC
GCCAATCTTCACGTGGGCCGACCGCGGGATGACCCCACTACATTGGTTTT
AGCGAGAAACCTAAAGTTCTACGAATTCCGGCGCAAGGATCTGGTGCACT
ACATCGATTTGAAGGTCACGAAACTAAAGCAAATAGCCACCCAACTGGAG
GCCTACGACGGACCGGTTTGTCCCTTTCTGTCCAAGCAGGAACCCACTGA
CGAAAAGGTGGACTGGAGCATGCTGGATCCGCCGGAGGATTTGCCCCTCA
AATTTGGAAAGTTTGTGTGGCAACGGGAGGGCATCTACCTGTTAATTCAG
TGCTGGAAGCATCTCGTCGTCCTAAAGAGGCCCAAGGATCACGGGGCCAA
CTTCGAACTGGTGGCGGATCACAAGGATGTGGTGGACTACCAGATGGTCG
AAGGTCCCATTTCCTTCCAGGCCGTTGTGGAACTGGAGTTCGGCAATGGC
AAGCGTCAGCGTTGTGATTTCCAGGAGGATTTCTTAAATGAGGAGCCCAG
CACGTCCAAAAATGCGGGGCTTGCCCGCGAAGGATTTCGAGAACCTGCTG
CAGGAGGTGCACCGCGCCCATGCCGAGCTCGACAGCCAGCGAATGCAAAA
ACCAGAAGGAATTAGCCCACGTCCAAGACCTTCTATACTTCGGCACGCCG
GGCCAGCGTTCGCTGCTCCTTGAGGAGAAGCAGCCCGCTCCGACGACTCG
GCGATGTATGGACTCGGATCTGCGGCGATTATTTTGTTTGTGGCACTCTG
CTATTCAACATAACTGGCACCAATCGCCTCACCATAGTCAAGGAATTGTA
TCCGATTGTTGTAATCGAACCACACACCGACTTTAGCGTGGAGCACCGCC
TGTTCCAGCTGCCTCTGCAGCGGATGGCCAACCACCGGAGGACTACGACC
AGCTGGCGCAGTTTGGGCCTGCCAGATCAGCATAGCAGGCGCTTCAAATG
GCAACCGTGGGAAAAAGGAAAGAATTCTATCGCCCGGACGATCTGCCGCG
ATGGTATGTAGCCTGCTCTGTGCTCAATTTTCTTGAGGCAGAAAATCTTA
TTGATTGGAACGTACGAATGGCGAGGATGTCTCCCCATAGC
FMO05996.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9114-RA | 2315 | CG9114-RA | 234..1366 | 6..1136 | 4955 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15331810..15332921 | 1117..6 | 4700 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:01 has no hits.
FMO05996.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:32 Download gff for
FMO05996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9114-RA | 77..1192 | 1..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:43 Download gff for
FMO05996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9114-RA | 516..1631 | 1..1117 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:22 Download gff for
FMO05996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9114-RA | 230..1345 | 1..1117 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:22 Download gff for
FMO05996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15331810..15332922 | 1..1117 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:32 Download gff for
FMO05996.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15225843..15226955 | 1..1117 | 96 | | Minus |
