FMO06009.5prime Sequence
1154 bp (1038 high quality bases) assembled on 2008-09-15
> FMO06009.5prime
CAGTCGACATGGGCAAGAAGACGAAAGTTGGAAAGACGCGCAAGGATAAG
TTCTACCAGTTGGCCAAGGAGACGGGCCTGCGATCGCGTGCCGCCTTCAA
ATTGATCCAGCTGAATCGCAAATTCGGTTTCCTCCAACAATCGCAAGTAT
GTTTGGATTTGTGCGCAGCTCCCGGTGGCTGGATGCAGGTGGCCAAGCAG
AATATGCCGGTGTCCAGCATTGTGATCGGCGTGGATCTCTTTCCCATCCG
TCCCATTGCCGGCTGCATTGGTCTCGTCGAGGACATCACCACCGAGAAGT
GCCGCCAATCGCTGACCAAGGAGCTGCAATCGTGGAAGGCCGATGTTGTG
CTCCACGACGGTGCTCCCAATGTGGGTAGGAACTGGCTGTACGATGCCTA
TCAGCAGATCTGTCTCACCCTCAACGCGCTCAAGTTGAGCACACAGTTTC
TGCGCAACGGCGGCTGGTTTGTGACGAAGGTTTTCCGCTCCAAGGATTAC
AATGCCCTGCTCTGGGTGCTCAAGCAGCTGTTCAAGAAGGTGCACGCCAC
CAAGCCGAGTGCGTCGCGTAAGGAATCCGCCGAGATATTCGTCGTCTGTC
AGGGCTACCTGGCGCCCGATCACATTGATCCCCGTCTCCTGGACTCGAAG
TATGTGTTCGAGGAGCTGGATCTCGATGCCAAAAAGAAGAGCAGCCTGCT
GCATCCCGAAAAGCAAAAGCGCATCAAGGCCGAGGGCTATACGGCCCAGG
ATATTGCGCTGCGCAACGATCTGGCTGCCACAGAGTTCCTGAAGGCTGAA
AATGCACTGGCTGCGCTGCAGGGCATCGGTTCGATTCGCATCGATGATCA
GCGCATTGCCAATCACAAGAAGACCACGCCAGAGATTCTCGAGTGCTTGC
AAGATCTGAAGGTATTGGCCGCAAGGATATCAAGGTCTCGTGCATGTGGA
AGGATGTAGGAGTTGTTCGTGAAAAGGAAACCCACTGTTCGTCGGCAATG
CCGCAATGAGAGCCAAGCCATGACCAGCGAAATCGAGGACATGGAAGATG
CGAGCTGCAACGCAATGAAGACATTGTCGAAGAGAAAGAAGACTTGAACG
TTAGCGTAGAAGACGCCAGAACAGGCCGAATGCCCGAAAGAATGACCTAT
GGTA
FMO06009.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8939-RA | 2622 | CG8939-RA | 109..1240 | 9..1116 | 4955 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15997124..15998128 | 9..1005 | 4590 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:02:27 has no hits.
FMO06009.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:42 Download gff for
FMO06009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8939-RA | 104..1231 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:02 Download gff for
FMO06009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8939-RA | 83..1210 | 1..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:13 Download gff for
FMO06009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8939-RA | 104..1231 | 1..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:13 Download gff for
FMO06009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15997119..15998197 | 1..1065 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:42 Download gff for
FMO06009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15891152..15892230 | 1..1065 | 97 | -> | Plus |
