FMO06010.5prime Sequence
1161 bp (988 high quality bases) assembled on 2008-09-15
> FMO06010.5prime
CAGTCGACATGTCGCGATCCGCACAAGAAGCTGCGGCGCTGCTGCGGGGA
CTGCGGATCTTGTTGGAGGCGTGTGGGCGCGAGCATCTCGCCCACGGTCG
TCATCTGTGGAGCAATTCAAGCATTCGTGAGCTAATCGCCGAGAATGTGG
CGCACACACAGCAGCTGGTGAGAAGTTCCAGTCAAAATCCCACCGAGGAG
CTGAAAAAACTGCAGCAAACTGTAAAAGAAACGGGCGAAAGGGGCTACGT
GGTGGCCAAAGGTATTTGCTCGCTGCTGGAGACGAAAATCAAGATGTCCC
GCGAGGAATCGGCCATCTCTGAGCCTGCACAAGTCTCCTCAATTCGTAAA
TCCACACCCACGGCACAAAATCCAGCAAGTTGGGACGCCGCCAACTTGGA
TATATCATCCATAACGCTGCAGGAGTTCGAGGAGATACTCTCGCGCCGGA
ACAAAGATCGTAGTGTTAGCTTGCGCACCCCGGCAACCAAAAGCAACCAG
ACCATGCCCAAAAAAGAAACGTCAACCAATCCGGGCATCATTACCCAGGA
CACGGAGTATGTAAACAATGTGCTGCGGTTTGTGGCGGGCGCCAAGGTGG
AGGAGCAGCCACCAGATGCGCAGCCGAAGAAGAAGTCCGACCAGCCGGCC
ATTGAAGTGCCCGAACTGAGCAAGGTGGCCAAACAGCGCAAGGTTCCCTC
CTCCCGGATAGGCAGAATGGCCTCCTTTGGCGGCCTGTTCGCCGGCCTGG
GCCTGGGAACCCTCAACGAGCTGACCAAGGGTGCACTCGGCCTGGGCGGT
TCGACCAGCATGCGAGAGGCGTTGCTCAGTCCCGCCAATGCTGAACGCAT
CGTGGACACGCTATGCAAGGTGAGAGGAGCTGCCCCTGAAGATCGGACAA
TCCCTGAGCATACAAGATTCCAGCGTTGTGTCGCCGCAACTGGCCAAGGC
GTTTGAGCGGGTGCGTCAGCGGCGAACTAATATGCCCGAATGGCAGGTCG
AACGCGTGATGACACCCAATTGGGGTGCCGATTGGCGACAGCGTCTCAGG
AGTTCGAGGGACAAACCCCTTTTCGGCCTGCCTCCATTGGGCAGTTCATC
TGGGCAACGCCTGAGCGAATGGCAATGAATGTGCCATAAAGAATCCATTA
TCTGGGTTCCC
FMO06010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32649-RA | 2280 | CG32649-RA | 160..1297 | 9..1152 | 5180 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12899873..12900955 | 1094..9 | 4935 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:25:09 has no hits.
FMO06010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:55 Download gff for
FMO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 155..1278 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:55:45 Download gff for
FMO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 117..1240 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:07 Download gff for
FMO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32649-RA | 155..1278 | 1..1133 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:07 Download gff for
FMO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12899837..12900959 | 1..1133 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:55 Download gff for
FMO06010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12793870..12794992 | 1..1133 | 97 | | Minus |
