FMO06017.5prime Sequence
1169 bp (1025 high quality bases) assembled on 2008-09-15
> FMO06017.5prime
CAGTCGACATGCAGTCCGGGGCTCTGGCTAGGCCATGTCTGGCGATAGTC
CTGCTGGCGGGCGTCGTCCTGGTGGCCGACTCCTTCTACGTGCCCGGCGT
GGCGCCGGTGGAGTTCGTACAAGACCAAAAGATCGACGTGAAAGCCGTGA
AGATGACTAGCAGCCGCACCCAGCTGCCATATCAGTACTACTCTCTTAGG
TTCTGCTATCCCAAGAATGGCACGCTCATCTTTAAGTCAGAGAATTTGGG
TGAAGTTCTGCGCGGCGACCGAATCGTCAATACGCCTTACGAGGTGCGGA
TGAACCAGCAGGTCAACTGCCGGCTGTTGTGCAACCAGAAGGACAGACCG
CTCACTTGGAGTAAAGAGGACTCCGCACTGGTTGCGGAGCGCATCCAGCA
CGAGTACTTTGTGCATCTGCTCGTGGACAATCTGCCGGTGGCCACGCGCA
TCGTCAGCGTTAACAATCCCGCGGAGGTGACCTACGAGCACGGGTATCGT
CTAGGCCAAGTGGACGGGGACAACATCTACATCAATAACCACCTGAAGTT
TATCCTATCCTACCACATGCACTCCAAGGATAAGTATCGTGTGGTTGGCT
TTGAGGTGGAAACCGTTTCGGTCAGTCACAAAGAGCTGAAATTCCATGGG
GACACCTGCAACTTCCCAGACAGCGCCCGACCGCAGCTGGTCAATCCGAA
CGGAGAGACGCAGCTATATTTCACGTACTCTGTGGAGTGGAAGGAGTCCA
AAGTGAGCTGGGCCTCACGATGGGACATCTACCTTGGCATGCGCGATGTC
CAGATCCATTGGTTCAGCATCATCAACTCGCTAGTGGTGGTCTTCTTCCT
GTCTGGCATTCTCACTATGATTATGATTCGCACCCTGCGTCGAGACATTG
CCCGCTACAATACGGATGACCATAATTGAAGATACATTGAAGAGACCGGT
TGGAGCTTGTGCATGAGACGTATTCCGTCCGCCCAAGAATACTAGCTGTT
TTCGCGATTATCGCATGGCAATCAAATCTTCTTATGGGCCCTCATCACAT
CTTCTTTGCCATGTGGGCATGCTGTCCGCCATCGTCGCGTGGCGGCCTCA
TGACCCTCGGGACATTATATGTACGTTCATGGGCACCATATGCCGATATC
ATATGCTGCGGTTCTACAA
FMO06017.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TM9SF4-RB | 2669 | CG7364-RB | 355..1490 | 9..1136 | 5145 | 97.7 | Plus |
| TM9SF4-RA | 2461 | CG7364-RA | 147..1282 | 9..1136 | 5145 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13771334..13772434 | 12..1105 | 4820 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:34:59 has no hits.
FMO06017.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:37 Download gff for
FMO06017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TM9SF4-RA | 139..1259 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:17 Download gff for
FMO06017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7364-RA | 147..1267 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:25 Download gff for
FMO06017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TM9SF4-RA | 139..1259 | 1..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:25 Download gff for
FMO06017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13771327..13772443 | 4..1116 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:37 Download gff for
FMO06017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13771327..13772443 | 4..1116 | 97 | | Plus |
