FMO06022.5prime Sequence
1157 bp (1012 high quality bases) assembled on 2008-09-15
> FMO06022.5prime
CAGTCGACATGCCTTCCCTTTTGGAGGCGCTGGAGCGCAAGTACTTCGCA
GAATGCGAATTCGAGAATGCCCACCAACCGGAACTCCACAAACGAAGCGA
CCTGCCCAATGACTTTACGGTCACCAAGTGCGGCGGACGCATGGAGTTCT
CCATCTTCATACCCCGCCTATCCCCGCTGACCAGTGTGCCAGCCTTGCTA
GTCCTCAACGACTGTGACATCGATTCGGCCGGGGACTTCGACAGCATCCG
GGAGAAGTGCCAGCGGGTGAGGGAACTGGATCTGGCCCAGAACAAGCTGA
GCGACTGGTCGGAGGTCTTCAGCATACTGGAGCACATGCCGCGCATTGAG
TTCCTCAACCTGAGCAAGAACCAGCTGGCCAGTCCGATCGGCACGTTGCC
CACGGCTCCCACGATCAATCTGAAGAGCCTGGTGCTGAACGGCACCTACT
TGGACTGGGCCTGCGTGGATACCCTGCTGAAGAATTTGCCCGTGCTCCAG
GAACTGCATCTCAGCCTGAACAACTACAGGCAGGTGCTGATCGATGCTGA
GGAGGCGGAACAGCGGCTGCAGGAAACGGAAACGCCAGAGGAAACCGAGC
GGCGAATCACCAAAGCACATCCTGCTCTAAAGACCCTGCATTTCACCGGT
AATCCCGTCGAGCACTGGCAGGAAATCTGCCGGCTGGGCCGGCTGTTTCC
CAACCTCGAGGCCCTCGTTCTGGCAGACTGTCCCATCAAATCGCTGCAGG
CCGAGGAGAGCAGCGAGACACATAGATACTTCCCCAGCCTGAGGCTTTTG
AACCTAAGTTTCCGCGCAACTGGATAGCTGGGCGGCCATCGATGAGCTGG
CAAGTTTAGCGAGCTACGCAACCTCCGTGTGAAACACTGGCCCCCTCTGG
GAAAGTCTGGAGTGCACGGAGCACGAGAGAAGCAGCTCCTGATAGCCAGG
CTGCCCACGTGGAAGATGCTCACGGAGGCGGCAGATCAGTAGCGATGAGC
GCGTCGACTCGGAGGGAGCTTTTTGTAAGATACTATATGGACAAGCCCGA
GAAGACGGCCTGCCCGCTACCAAGGCTCTGCAGATCCCACGCAAGCTGAT
CCCTTGTCATGTGTACCTAACCGAACAGCCGTTCAAGTCCCTGTTTCACC
CTACACA
FMO06022.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mlt-RC | 2669 | CG12214-RC | 536..1639 | 9..1106 | 5080 | 98.1 | Plus |
| mlt-RA | 2195 | CG12214-RA | 536..1639 | 9..1106 | 5080 | 98.1 | Plus |
| mlt-RB | 2542 | CG12214-RB | 883..1986 | 9..1106 | 5080 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10156981..10158049 | 1074..9 | 4795 | 98.2 | Minus |
Blast to na_te.dros performed 2014-11-28 22:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 2799..2853 | 476..530 | 113 | 67.3 | Plus |
FMO06022.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:41 Download gff for
FMO06022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mlt-RB | 873..1995 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:04 Download gff for
FMO06022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12214-RA | 508..1630 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:07 Download gff for
FMO06022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mlt-RB | 873..1995 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:07 Download gff for
FMO06022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10156937..10158057 | 1..1113 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:41 Download gff for
FMO06022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6044442..6045562 | 1..1113 | 97 | | Minus |
