FMO06023.5prime Sequence
1138 bp (988 high quality bases) assembled on 2008-09-15
> FMO06023.5prime
CAGTCGACATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCTACGTGGAA
ACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAAACGCTGGC
CGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGTGGAGCGCA
AGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACCTGCCCGCC
GGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACGGGAGCCCC
GTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGGAGCTCCCC
CAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGGTCAAGATA
ACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTTAAGGAGGT
GGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGATAGCGACA
CCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGGGTTGCGAG
TGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTTATCTTCTT
GTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCATGATGTGCC
TGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATATCGTACAAA
ACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGTTCGGCGCA
TACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCACCAAAAATG
GAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCGACTCGCA
GGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACCCTCGGCG
AACGGGGATCCCACTGCCGGCGGTGCTCTATATAGCGTGCCGTCGAAGGC
CATGAAAGATGACTACGAGTGTTGTGCGCAAGGAAGCTCTACAGCTGGTC
TTCATGCTGGGCAATCGGCATCCGGACTACAATTTACCCTCGGACGCAGC
AAGGAGGAGCTGCCCATGATAGACGCTGCGTTCAGCAAGTCTGCCAGCCT
GGTGGCGATCTATCGCTGCAATCCGGTGCCTCGCAACGTATGCTCGGTGG
ATACCGCCCGTAGCAGAGTTCTACCCGAACTCTGACAA
FMO06023.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS4-RA | 3466 | CG12113-RA | 83..1177 | 8..1100 | 4985 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8557670..8558699 | 1039..8 | 4765 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:38 has no hits.
FMO06023.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:27 Download gff for
FMO06023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 83..1163 | 8..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:07 Download gff for
FMO06023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0095-RA | 63..1143 | 8..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:44 Download gff for
FMO06023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS4-RA | 83..1163 | 8..1088 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:44 Download gff for
FMO06023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8557619..8558699 | 8..1088 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:27 Download gff for
FMO06023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8451652..8452732 | 8..1088 | 97 | | Minus |
