FMO06034.5prime Sequence
1143 bp (1049 high quality bases) assembled on 2008-09-15
> FMO06034.5prime
CAGTCGACATGAGCAACAAACTGGGCTATGATGTGACCGATCCCACTGTC
CAATTGCTCCGGGCATCGGCGTTCATGCAAAATGGGCCAGTGAAGCAGGT
TCGCAGCCTGGAGGATCTGGACCGCTGGGTTCGCTCGCAGGCATATTACG
ATATCATTGCGTACATCAGCAACACCAGCAAGGCCATCCAGGGTCATCGT
TTGACGCAGACCTTTCCGGTCACGGAGCAGATGCGTCGATTGAGCGAGAT
ATTCGATGGACTGGATCACCTGATTGTCGAGCATACACCGAAAATTGAGG
ACTCGTATCTGGCGTTACCGTTCGGCCAGGTTAGAAGCAAGGCCTATCGC
ACTTGGATGCGAGAGATGTACCAGCATGTGTTTAGCAAACTGGACGAGGC
CATCAATGTGAACTGCAAGCACATCAACGAACTGGGACAATACCTTCGAC
GATCGTTTGGTAATGGGAACACCCTGGATTTTGGTCCAGCCAACGAGTTG
ATGTTCCTTTTCTTTCTCTGCGGCCTATTTCGCGCCGGTATCCTGTTGGC
CAAGGATACGGTGGCCGCTGCACTGATGCTCTTCAATCGCTATGTGAATG
TGGTTAGGCGCCTGATAAGCACCTATGGACTGACCATTGCCAAGGATCCG
GCGTGCACCATCGAAGACTACTACTTTTTGCCGTATCTATGGGGTGCGGC
CCAGTTATCGGTGGATTCTCCCTTCTCGCCGATGCAGTGTGAGCAGGGGA
AGATAATGGATAATTATAGGCAGGACTTCATGATGCTGGAAATCATTGAC
CACCTGCAGAAGACCCGCAGCGGTCCATTGAGTCGCGTGGCCCTGCAGCT
GTGGAGCATCCTATCGATACCCACGTGGCCGCAGTCTACAGGGGATTGGA
GCGCAACTACATCGACCATGTGCTCTCTCGTTCGGAACCGTGAGCAAGCC
ATCTTCTGCGAACTGATGTCCTTTGAGGCGGTTGTACCGATCATGCCTCT
GCAACGGGCACACTTGGGCACCCACTTATAGTGGATGAGAGAGACGAGGA
TGACTTCAGCAGAAATATGGGGTAATCGATGTCGCTATCGCCACGGTCAG
CAAATTGTTCACATGACCGAATCTTTCCCGCTTCAGGCATCAG
FMO06034.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8509-RA | 1393 | CG8509-RA | 50..1154 | 9..1102 | 5215 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15809604..15810639 | 9..1040 | 4980 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:29 has no hits.
FMO06034.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:22 Download gff for
FMO06034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..1168 | 1..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:30 Download gff for
FMO06034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..1168 | 1..1115 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:04 Download gff for
FMO06034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8509-RA | 46..1168 | 1..1115 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:04 Download gff for
FMO06034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15809600..15810722 | 1..1115 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:22 Download gff for
FMO06034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15703633..15704755 | 1..1115 | 98 | | Plus |
