FMO06035.5prime Sequence
1135 bp (1014 high quality bases) assembled on 2008-09-15
> FMO06035.5prime
CAGTCGACATGGACGACAACGAGGATGAGCTGGAGGAGCACCAGGAGCTG
GTCAGCGACGGCAGTGTCGAGGAGGAGGAGGAGGTGGAGCCCGATCTGGG
ACCAGTGGACAGTTGGGAGTCCTTTAATGACCGCATCGATGGCCTGATCT
TTAACGAGCGATGCGACAAGTCGGTGAAGAAGTTGGACGAACGCCGGCTG
GCGATACTCAACCGGGTGCGTCAGCAGTTCCGCGAGGCCCCGAAAGGCGT
CGCCGAACGTTGCCAGGCCCAGAAGTCGCCGATTGATCAACGGCTGGAGT
TGTCCAGTGAGCGATTGAACGAACTGGTGCGCTTTGGCAAAGAACTAGTG
ACCAATGTCCGGGTGGCCAACGAGCGAAGGGAGCTGAATCGCCGACTCTT
CGAGGGTGCGCAGAAGAATCAGATGCATGTGAAGCTGCAACGCGAAAGCG
TTGAGACAATGGCCCGTTTCGAGAACATTAAGGCGCGCTGGACGGAGCTG
GAGGAGACCAATGAGCCGATGCTGTTGTGGGACCAAATCGAAGAGCAAAA
GAAACGCATTGCCGAGATTATGGCACGCAAGGATGAGATGATATCTGCCT
GCCAAGCGGAGGTGGACCGCATGAATGCCAAGTACGAGTTCGATCGCGAG
CGGCAGGCCCAGGATCTTTGTTGTCTGGTGGAGCGCGTTGATCACCAGGT
GGAGACGCTTAAGGAGGCCTACAAGGAGCACATCCAAATGCTGCGGCAAA
CCATCGAGGAGGAGCGTCAAATCTTCGCCGATAATGCGGTGGAGAAGTGG
CGCACCTTCTTCGATGCGATGAATGCCAACTTTGACGAGAAGGCCAATTT
GGTAAGGGCACGCGAGCAATTCTATGCTCGCCAAACCCAGCAGATCAACG
AGTCTCAGGAGAGCTGACCAAGAGCACTCGCATTCGGCTGGAGAAGAATG
CGAGAGCTCGAGCTGGAGCTACGTCGCACGCCGCGACAATTGTGCTGATG
AACTCGAGAAGCTGGACTACAACTATTCAGGTCCTCCAGAGCGCAACGAG
GAGACGTGAATCATTACAACAGCAGAAGCGAACTGTGTCCTACTGCATGA
AGCGATCGAAGCACACGGGCTGCTGAAATTTACAC
FMO06035.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10958-RA | 2683 | CG10958-RA | 228..1332 | 9..1108 | 5085 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8132512..8133559 | 9..1054 | 4810 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:02:59 has no hits.
FMO06035.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:09 Download gff for
FMO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 228..1309 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:33 Download gff for
FMO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 107..1188 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:37 Download gff for
FMO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10958-RA | 228..1309 | 9..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:37 Download gff for
FMO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8132512..8133593 | 9..1088 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:09 Download gff for
FMO06035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8026545..8027626 | 9..1088 | 98 | | Plus |
