FMO06047.5prime Sequence
1133 bp (989 high quality bases) assembled on 2008-09-15
> FMO06047.5prime
CAGTCGACATGTTCGGCACCGTAAATAACTATTTATCCGGCGTTTTGCAC
GCCGCCCAGGATTTAGATGGCGAGTCCTTGGCCACGTATCTCTCCTTACG
AGACGTGCACGTTCAGAACCACAATTTGTACATTGCCCAGCCGGAAAAGT
TGGTGGATCGATTCCTGAAACCGCCACTGGACGAAGTTGTGTCCGCCCAC
CTGAAGGTGCTGTATCACCTGGCACAGGAGCCTCCTGGTTACATGGAAGC
CTACACCCAACAGTCGGCAGCCTGCGGAGCCGTTGTGAGGCTTTTGCAGC
AGCTGAAGGACGAGAATTGGTGCCTGCCACTAATGTACCGCGTGTGCCTG
GATCTAAGGTACTTGGCGCAGGCCTGCGAGAAGCATTGTCAAGGATTCAC
ACCTGGCCACGTATTGGAGAAGGCTGCCGACTGCATAATGGCCTGTTTCC
GCGTTTGTGCCGCTGATGGACGAGCTTCAGAGGAGGACACCAAGCGTCTG
GGCATGATGAACCTCGTAAACCAGCTATTCAAGATTTATTTTCGAATCAA
CAAGTTGCATCTGTGCAAGCCCCTTATCCGTGCCATCGATAATTGCATCT
TCAAGGATTCTTTTCCGCTGCCGGAGCAAATTACCTACAAGTATTTTGTA
GGTAGACGGGCTATGTTCGACTCCAACTACCAGGCAGCCGTACAGTATCT
GTCGTATGCCTTTAGCAACTGCCCGGATCGGTTTGCCAGCAACAAGAGGC
TCATCCTCATCTATTTTGGTGCCAGTGAAGATGCTGCTGGGGATATCTGC
CCAGCAAATCCCTTACTGCAGCGCTACGATCTCCTGCTGTTTCTCGATCT
GGCTATGGCCATGAGGCTGGCATGTGAATCGCTTTGATGAGATTGTCAGG
ACCAGGAGCTGGTGCTGATCAGGGGTTGTATCTATCTGCTGGTGGAGAAG
CTCAAGTTCCTCGTGTATCGCAACTGTTCAGGACGTGTCGTCATCCGGAA
ATCGCATCAATTGGAAATGGTGACTTCCTCTTCCGCTTGCATTTCGTGGC
CTTAACCGAATGTTTCCTGGACAGAACCCACTGCATCTGGGCCATTTCTA
TTTTCAATGGAAAAGATTATAGGGGTATTCTCC
FMO06047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PCID2-RA | 1275 | CG7351-RA | 40..1160 | 9..1127 | 4940 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11626480..11627588 | 9..1113 | 4645 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:25:43 has no hits.
FMO06047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:14 Download gff for
FMO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PCID2-RA | 34..1129 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:56:59 Download gff for
FMO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7351-RA | 35..1130 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:22 Download gff for
FMO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PCID2-RA | 34..1129 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:22 Download gff for
FMO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11626474..11627569 | 1..1094 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:14 Download gff for
FMO06047.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11619574..11620669 | 1..1094 | 97 | | Plus |
