FMO06051.5prime Sequence
981 bp (979 high quality bases) assembled on 2008-09-15
> FMO06051.5prime
CCTATACGAAGTTATCAGTCGACATGGGTATCGAAAAAATTCTACCATGC
ACCCTCCGGCTGAACAAGCTGATGAGTCTGGCCGGCAACGACTGCCTGTG
CATCATCGATCGCAATGCGGTTCCCAATGAACTGAAGGCCACCTTCGAGG
AGCACCGCAAATTCGACAAGTCCTTCGACAGCAGCATATCCTGCTTTAAG
GTGCCCAACGTGGATCAACCTGTGGTCTATGCCCCCGTCTCCGAGCTCAC
CGACTACGACGATGTGAGGAGCTACCAGGAGGCGGCCAAGCGGTCCATGG
AGAAGGTTCTCAAGGCTGGATTCCACACGCCGTTGCTGTTTGTGCCCAAG
GTTAAGCGCTTCCCCGAGGTCGAACTCTGCACCGTTCTGGGAGCTCTGGA
GCAGCTTTATGTGCCCATTCAATTGCGCGAGGCAGGAACTTTGAAGGACC
CCCGTGTGACCACGCTCAGTGTCCAGATCGATGATCCAAGGGCCGAAGCT
ATTTTCCAGGAAGCTCTCATTCTGGAGGCCGGTCGCTTTGTGGCCCGCGA
CATCGGAGTTGGGGACCCGGAGCGCATGACGCCCATCCAGGTGGAGAAGT
ACATCAAGCCGTTGTTCGACAAGCTCAACGTGAATGTGATCAGTGACACC
CAGGTGTTGCAGAAGGAGTATCCCCTGTTTGCCGCCGTAAACCGGGCTGC
TGATGCAGTGGAGCGTCATCGTGGTCGCATCATTTTCCTGGAGTACAAGC
CTCCAAAGCCGGCGAGAAAAACTCTGATGCTGGTCGGCAAGGGTGTTACC
TATGACACCGGTGGTGCTGACATCAAGGCCGGTGGTGTGATGGCCGGTAT
GTCGCGCGACAAGTGTGGAGCGGCTGCTGTCGCTGGATTCATGCAAGTGG
TCAGTCAACTGCAACCGGATGATATCCATGTTGTGCCTGCCCTGTGCATG
GTGCGCAATTCCCGTGGGCGAAGGAGTGCTA
FMO06051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-B-RD | 1813 | CG9285-RD | 63..1019 | 23..981 | 4715 | 99.6 | Plus |
| Dip-B-RB | 1938 | CG9285-RB | 188..1144 | 23..981 | 4715 | 99.6 | Plus |
| Dip-B-RC | 2047 | CG9285-RC | 297..1253 | 23..981 | 4715 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13784316..13784865 | 413..962 | 2720 | 99.6 | Plus |
| 3R | 32079331 | 3R | 13783817..13784094 | 38..315 | 1390 | 100 | Plus |
| 3R | 32079331 | 3R | 13784159..13784259 | 313..413 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:05:06 has no hits.
FMO06051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:47 Download gff for
FMO06051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-B-RA | 278..1237 | 19..980 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:57:38 Download gff for
FMO06051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-B-RB | 184..1143 | 19..980 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:05 Download gff for
FMO06051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-B-RC | 293..1252 | 19..980 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:05 Download gff for
FMO06051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13783817..13784093 | 38..314 | 100 | -> | Plus |
| 3R | 13784161..13784259 | 315..413 | 100 | -> | Plus |
| 3R | 13784317..13784881 | 414..980 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:47 Download gff for
FMO06051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9609539..9609815 | 38..314 | 100 | -> | Plus |
| arm_3R | 9609883..9609981 | 315..413 | 100 | -> | Plus |
| arm_3R | 9610039..9610603 | 414..980 | 99 | | Plus |
