FMO06058.5prime Sequence
515 bp (515 high quality bases) assembled on 2008-09-15
> FMO06058.5prime
CAGTCGACATGCCTGCCGAAAACTTGGAGGAGCAGGGTCTGGAGAAGAAC
CCGAACCTGGAGCTGGCCCAGACGAAGTTCCTGCTTACCCTGGCGGAATA
CAAGCAGGATGCGGCATTGAAGGCGAAGCTTCTGGAGGCGATTCGCACGG
AGAATATGGCCCCGTGGTACGAGCACATCTGCTCGGAACTCGGCTGGACC
GTAGACAAGGATCTGCTGGCGCGAATGAAGGAGAACAACCGCGTAGAGGT
GGAGCAGCTAGATGCGGCAATCGAGGATGCGGAGAAGAATCTGGGCGAGA
TGGAAGTGCGCGAGGCGAATCTTAAGAAGTCAGAGTACTTGTGCCGCATC
GGCGACAAGGCTGCCGCAGAGACTGCCTTCCGCAAGACCTACGAGAAGAC
CGTTTCCCTGGGTCACCGCCTGGACATCGTGTTCCATCTGATCCGCTTGG
GACTGTTTTACCTTGACCACGATCTCATCACTCGCAACATCGACAAGGCC
AAGTATCTGATCGAG
FMO06058.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpn7-RA | 1393 | CG5378-RA | 133..639 | 9..515 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22461416..22461922 | 515..9 | 2535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:53 has no hits.
FMO06058.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:39 Download gff for
FMO06058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn7-RA | 133..639 | 9..515 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:57:27 Download gff for
FMO06058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn7-RA | 129..635 | 9..515 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:56 Download gff for
FMO06058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn7-RA | 133..639 | 9..515 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:56 Download gff for
FMO06058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22461416..22461922 | 9..515 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:39 Download gff for
FMO06058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18287138..18287644 | 9..515 | 100 | | Minus |
