FMO06059.5prime Sequence
596 bp (596 high quality bases) assembled on 2008-09-15
> FMO06059.5prime
CAGTCGACATGCCGGAAGGGAATAAAATCGACTTGTCCGGGGACGGTGGC
GTCCTAAAGGAGATCCTGAAAGAGGGCACGGGCACAGAGACGCCGCACAG
CGGATGCACTGTGTCCCTGCACTATACGGGTCGCCTGGTCGATGGCACGG
AATTCGATTCCAGCCTCAGTCGCAATGAGCCCTTCGAATTTTCGCTCGGC
AAAGGCAATGTGATCAAGGCCTTCGACATGGGAGTTGCCACCATGAAGCT
CGGCGAGCGCTGCTTCCTAACATGTGCTCCAAACTACGCTTACGGAGCTG
CCGGCAGCCCGCCAGCCATTCCGCCGGATGCTACTCTGATTTTTGAGCTG
GAGATGCTCGGCTGGAAGGGCGAGGATTTGAGTCCCAACCAGGACGGAAG
TATTGACCGCACCATTTTGGAAGCCAGCGATAAAAAGCGCACTCCCAGCG
ATGGCGCCTTTGTCAAGGCTCACATTTCTGGTAGTTTCGAGGGCCGCGTG
TTTGAGGATCGCGATGTGGAGTTTGATTATGGCGAGGGTAAGGCCATCGG
CATTATCGATGGTGTCGAAATTGCCCTGGAGAAGATGAAACGTAGG
FMO06059.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| FKBP59-RB | 1587 | CG4535-RB | 139..725 | 9..596 | 2915 | 99.8 | Plus |
| FKBP59-RA | 1494 | CG4535-RA | 46..632 | 9..596 | 2915 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9888143..9888339 | 9..205 | 985 | 100 | Plus |
| 2L | 23513712 | 2L | 9888402..9888546 | 203..347 | 725 | 100 | Plus |
| 2L | 23513712 | 2L | 9888665..9888787 | 346..468 | 615 | 100 | Plus |
| 2L | 23513712 | 2L | 9888846..9888967 | 468..589 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:43:24 has no hits.
FMO06059.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:56 Download gff for
FMO06059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FKBP59-RA | 37..632 | 1..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:57:30 Download gff for
FMO06059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FKBP59-RA | 101..696 | 1..596 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:23 Download gff for
FMO06059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FKBP59-RA | 37..632 | 1..596 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:23 Download gff for
FMO06059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9888134..9888338 | 1..204 | 98 | -> | Plus |
| 2L | 9888404..9888546 | 205..347 | 100 | -> | Plus |
| 2L | 9888667..9888787 | 348..468 | 100 | -> | Plus |
| 2L | 9888847..9888973 | 469..596 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:56 Download gff for
FMO06059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9888404..9888546 | 205..347 | 100 | -> | Plus |
| arm_2L | 9888667..9888787 | 348..468 | 100 | -> | Plus |
| arm_2L | 9888847..9888973 | 469..596 | 99 | | Plus |
| arm_2L | 9888134..9888338 | 1..204 | 98 | -> | Plus |
