FMO06062.5prime Sequence
676 bp (676 high quality bases) assembled on 2008-09-15
> FMO06062.5prime
CAGTCGTCATGAATCGAGCCTGGTTGTGTCTGCTGATCTGCCTGGCCTTA
AGCTGCGGTCCAAGCCAATCAGCCAGCCAGGATCGTGCAACGAACCAAAC
GGCAGCGAGTCCGCTGCTGAAACAATCTCAGAACACATTTATCCAATGGG
TTCTCTCACTTTTGCCCCAACGTCCCGGCAGTTCGGATTCGGAAAATGCC
ACTCTGGCCACCTTGAGCAGCAGCTCTATGATGCCGGACGCGGCATCTAC
CACATCAACCACCACACCAGCCCCGTCTTCCAGCACCACTACAACGAGAA
GGGCAACCACTCCGGCCCCACCCACTTTGAATCCGCCAAGGAATTGCAGC
GACTGTGTCTGCGGAATAGCCAATATACAGAAGAGAATAGTCGGTGGTCA
GGAAACGGAGGTTCATCAGTATCCCTGGGTGGCTATGTTGCTATATGGCG
GAAGGTTCTATTGCGCCGCCTCCTTGCTCAACGATCAATTCCTGTTGACC
GCATCGCATTGCGTCTATGGCTTTCGAAAGGAAAGAATATCGGTGAGATT
ACTCGAACATGACCGCAAGATGTCGCACATGCAAAAGATCGACCGCAAGG
TGGCCGAGGTGATCACGCATCCCAAGTATAATGCCCGGAACTATGACCAA
CGATATAGCCATCATCAAGTTGGATG
FMO06062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4386-RA | 1510 | CG4386-RA | 74..740 | 9..676 | 3315 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21800165..21800831 | 676..9 | 3290 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:58 has no hits.
FMO06062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:04 Download gff for
FMO06062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4386-RA | 68..740 | 2..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:57:53 Download gff for
FMO06062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4386-RA | 64..736 | 2..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:12 Download gff for
FMO06062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4386-RA | 68..740 | 2..676 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:12 Download gff for
FMO06062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21800165..21800837 | 2..676 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:04 Download gff for
FMO06062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17687670..17688342 | 2..676 | 99 | | Minus |
