Clone FMO06073 Report

Search the DGRC for FMO06073

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:60
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptBHD-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06073.5prime Sequence

595 bp (595 high quality bases) assembled on 2008-09-15

> FMO06073.5prime
CAGTCGACATGAACGCCGTGATAGCGCTGTGCCACTTTTGCGAGGCGCAC
GGTCCCTGCGCCATCTTCTGCACCCAGACACTGAGGGACACCAAGCTGGA
GGACCTGTCACTGGAACAGCAGACGCAAAAGACCTGCTCCGCCTGCAATT
ACTCCATGGGCAAGAATAACAATGCGATCTACAGCAGGGACACGGAAAGC
GGGGCCACATTCGTCAGCACCAAGGTGGCGGTGCTGCCGGAGGTGGCCAG
TCTGGTCAAGCAGGCGGCTGTGCTCAGTCTGAGCAATGGTACGGATGCCA
GCAAGGATGGCGAGTTCGTGTTCTTTGGCGATTCGTCCAGGGGTCACATC
CTGAGTCACACCTTCCGAGTGAGCGACCTGCAGGCCCGCGGCTACTCGCA
GCTGTTCTCCATCATTGTGCTGATGAAGGACAAGTATTTCCTGCTTAACA
TCAAGCCCTTTCTGGCGGAGCACCTGAAGAAGGTGTCGTCGGAGCTGCAG
GCAGCTGCCAAAAAGACCAAGGAGACGGAGGAGCAGACGTACTCAGAGCG
ACAGAGGCGTCTGTCCGGCGCTCAGTTCCTGATGCCTACTTCCCC

FMO06073.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
BHD-RA 1557 CG8616-RA 94..679 9..594 2900 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7238635..7239220 9..594 2900 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 19:57:35 has no hits.

FMO06073.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:28 Download gff for FMO06073.5prime
Subject Subject Range Query Range Percent Splice Strand
BHD-RA 89..679 1..595 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:04 Download gff for FMO06073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8616-RA 89..679 1..595 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:19 Download gff for FMO06073.5prime
Subject Subject Range Query Range Percent Splice Strand
BHD-RA 89..679 1..595 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:19 Download gff for FMO06073.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7238630..7239220 1..595 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:28 Download gff for FMO06073.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7231730..7232320 1..595 98   Plus