FMO06075.5prime Sequence
213 bp (213 high quality bases) assembled on 2008-09-15
> FMO06075.5prime
CAGTCGACATGAGCACAATATTGGAGAAAATCTCGGCCATCGAGTCGGAG
ATGGCCCGAACCCAAAAGAACAAGGCCACCTCGGCCCATTTGGGTCTACT
GAAGGCGAAGCTGGCTAAGCTGCGACGCGAACTGATTTCCCCCAAAGGAG
GCGGCGGCGGAACCGGCGAAGCTGGCTTCGAGGTGGCCAAGACTGGAGAT
GCCCGGGTGGGAT
FMO06075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
128up-RA | 1304 | CG8340-RA | 125..330 | 8..213 | 1030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12037595..12037717 | 49..171 | 615 | 100 | Plus |
2R | 25286936 | 2R | 12037769..12037812 | 170..213 | 220 | 100 | Plus |
2R | 25286936 | 2R | 12037422..12037464 | 8..50 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:57:49 has no hits.
FMO06075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:14 Download gff for
FMO06075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
128up-RA | 117..330 | 1..213 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:07 Download gff for
FMO06075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
128up-RA | 109..322 | 1..213 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:02 Download gff for
FMO06075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
128up-RA | 117..330 | 1..213 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:02 Download gff for
FMO06075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12037414..12037464 | 1..50 | 94 | -> | Plus |
2R | 12037597..12037717 | 51..171 | 100 | -> | Plus |
2R | 12037771..12037812 | 172..213 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:14 Download gff for
FMO06075.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7925276..7925317 | 172..213 | 100 | | Plus |
arm_2R | 7924919..7924969 | 1..50 | 94 | -> | Plus |
arm_2R | 7925102..7925222 | 51..171 | 100 | -> | Plus |