FMO06076.5prime Sequence
233 bp (231 high quality bases) assembled on 2008-09-15
> FMO06076.5prime
CAGTCGACATGGCCAAGGTTATATCGCAGGACACCTTCGACGATGTTGTG
AAGGAGAACGTTGTGGAGTTCTCGATGACTCCTTCGGAGGCGAAAGAAGA
GACCATCAAGCAATTCGAGGCACAGGGCATCAACCTGGCCAACATTATCA
AGGACCTGTCCGTCAATCCGCAAACCGGCCAACCTGTCATCAACGAAACG
GTGGACAAGATCAAGGAGCACATTGGCCTAAAA
FMO06076.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5721-RA | 1601 | CG5721-RA | 100..325 | 8..233 | 1115 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18183873..18183991 | 126..8 | 595 | 100 | Minus |
2R | 25286936 | 2R | 18183711..18183821 | 233..123 | 540 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:26:19 has no hits.
FMO06076.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:37 Download gff for
FMO06076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5721-RA | 94..320 | 1..229 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:58:08 Download gff for
FMO06076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5721-RA | 117..343 | 1..229 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:44 Download gff for
FMO06076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5721-RA | 94..320 | 1..229 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:44 Download gff for
FMO06076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18183715..18183818 | 126..229 | 99 | <- | Minus |
2R | 18183874..18183997 | 1..125 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:37 Download gff for
FMO06076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14071220..14071323 | 126..229 | 99 | <- | Minus |
arm_2R | 14071379..14071502 | 1..125 | 97 | | Minus |